Spiroplasma tabanidicola: STABA_v1c09990
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Entry
STABA_v1c09990 CDS
T06336
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stab
Spiroplasma tabanidicola
Pathway
stab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STABA_v1c09990 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stab03021
]
STABA_v1c09990 (rpoA)
03400 DNA repair and recombination proteins [BR:
stab03400
]
STABA_v1c09990 (rpoA)
Enzymes [BR:
stab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STABA_v1c09990 (rpoA)
Transcription machinery [BR:
stab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STABA_v1c09990 (rpoA)
DNA repair and recombination proteins [BR:
stab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STABA_v1c09990 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AF1548-like_C
I_LWEQ
Ribosomal_TL5_C
Motif
Other DBs
NCBI-ProteinID:
QGS52347
UniProt:
A0A6I6C604
LinkDB
All DBs
Position
complement(1163300..1164253)
Genome browser
AA seq
317 aa
AA seq
DB search
MRQFARPEFTLLKEENNKNYGEFKVEPLERGFGITLGNAIRRTLLSSTPGAAVYAIKIAG
AAHEFTSIEGIVENVSRIILNIKQLALRIDNNMFSLDEVVELSIKTSAVGPVKAGDIELP
TGVEVVNKDLVLCNIADGGVLDLTLFAKNSRGYRSFKDNKKEKLTVDSITIDSNYSPIIS
VAYDVDATKIGKSVDLEKLILKVKTDGTISASDAVATASKILVEHLHFFVNLNEEINELN
VIGVTSEEDEKELDKLIEDLDFTQRSLNCLKRANINTLRDLVSRSEDDIQEIRNLGRKSL
KEIKDKVVQLGLTFKQD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattcgctagaccagaatttactttactaaaagaagaaaataacaaaaattat
ggggaatttaaagttgaacctttagaaagaggatttggaattactttaggtaacgcaatc
agaagaactcttttaagttcaacgccaggagcagcagtttatgcaattaaaattgcaggg
gcggctcatgaatttacatcaatagaaggtattgttgaaaacgtaagtagaataatttta
aatataaagcaattagctttgagaattgacaataatatgttttcattagatgaagtagta
gaattatcaatcaaaacttcagcagttggacctgtaaaagcaggagatatagaattacca
acaggagtagaagttgttaataaagacttagttttatgtaatatcgctgatggtggagta
ttagatttaacactatttgcaaaaaactcaagaggatatagatcatttaaagataataaa
aaagaaaaattaacagttgattcaattacaattgattcaaattattcaccaattatatct
gttgcatacgatgttgatgctacaaagattggtaaatcagtagatttagaaaaattaatt
ttaaaagttaaaactgacggaacaatttcagcaagtgatgctgttgcaactgcatcaaaa
attttagtagaacatttacatttctttgttaacttaaatgaagaaattaatgagttaaac
gtaattggtgtaacaagcgaagaagacgaaaaagaactagataaattaattgaagattta
gactttacacaaagaagtttaaattgcttaaaaagagcaaatataaatactctacgtgat
ttagtttcgcgtagtgaagatgatattcaagaaattagaaacttgggtagaaaatcatta
aaagaaattaaagataaagttgttcaattaggactaacttttaaacaagactag
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