Streptomyces tabacisoli: ABII15_09990
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Entry
ABII15_09990 CDS
T11033
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
stac Streptomyces tabacisoli
Brite
KEGG Orthology (KO) [BR:
stac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stac03021
]
ABII15_09990
Transcription machinery [BR:
stac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABII15_09990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
KORA
Sigma70_r4_2
HTH_23
DUF7343
HTH_AraC
HTH_Crp_2
MarR_2
HTH_3
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
XCJ70280
UniProt:
A0AAU8IQ14
LinkDB
All DBs
Position
unmamed1:2150427..2151296
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AA seq
289 aa
AA seq
DB search
MSTVAVHEQAHITAGQVEASLIERAYADPASVRPKDARELGKHFFDRLAQLEEGTHEYSY
VRNVLIEMNLSLVRYAASRFKHRGQEEMEDIVQVGTIGLIKAIDRFELSREVEFTSFAVP
YIVGEIKRFFRDTSWAVHVPRRLQEARIELSKATEELHTRLGRTPSTAELAELMQLDVSE
VAEAQKASNGYNSVSLDAAVNGSDDESDTMLADFIGVDEDRFELVENFHSLAPLVADLDE
RDRRLIHLRFVEERTQQDIADELGYSQMHVSRLITKVVGKLRAGLMAAE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgtggcagttcacgaacaggcgcacatcacggccggtcaggtcgaggcgagt
ctgatcgagcgcgcctacgccgatcccgcctccgtgcggccgaaggacgcccgcgaactg
ggcaagcacttcttcgaccgtctcgcccagctcgaagagggcacgcacgagtacagctac
gtgcgcaatgtgctgatcgagatgaacctctccctggtgcggtacgcggcctcgcgcttc
aagcaccgcggccaggaggagatggaggacatcgtccaggtcggcacgatcggtctgatc
aaggcgatcgaccggttcgagctgtcccgcgaggtcgagttcacctccttcgccgttcct
tacatcgtcggtgagatcaagcgcttcttccgcgacacgtcgtgggccgtgcacgtgccg
cgccggctccaggaggcgcggatagagctgtccaaggccaccgaggagctgcacacgcgc
ctcggccgtacgccctcgacggcggagctggccgagctgatgcagctcgacgtgtcggag
gtcgccgaggcgcagaaggcgtccaacggctacaacagcgtctccctcgacgcggcggtc
aacggctcggacgacgagtccgacaccatgctggccgacttcatcggcgtcgacgaggac
cggttcgagctcgtcgagaacttccactccctcgcgccgctggtcgcggatctggacgag
cgggaccgtcgtctgatccatctgcgcttcgtcgaggagcgcacccagcaggacatcgcc
gacgagctcggctactcgcagatgcacgtctcccgtctgatcaccaaggtcgtgggcaag
ctccgcgccggtctgatggccgccgagtga
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