Streptomyces tabacisoli: ABII15_22850
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Entry
ABII15_22850 CDS
T11033
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
stac Streptomyces tabacisoli
Pathway
stac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABII15_22850 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stac03021
]
ABII15_22850 (rpoB)
03400 DNA repair and recombination proteins [BR:
stac03400
]
ABII15_22850 (rpoB)
Enzymes [BR:
stac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABII15_22850 (rpoB)
Transcription machinery [BR:
stac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABII15_22850 (rpoB)
DNA repair and recombination proteins [BR:
stac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABII15_22850 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XCJ72621
UniProt:
A0AAU8IW26
LinkDB
All DBs
Position
unmamed1:5004583..5008068
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AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNTAWQSRVEA
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTFAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADEPLDAGVLTTDDVIATIKYLVKLHAGETETVAESGRSIIVETDDIDHFG
NRRIRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRINPFGFIETPYRKVVEGVVGDDVDYLTADEEDRFVIAQANAPLNDDFQF
VENRVLVRRRGGEVDYVPGTDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRCATDAGDVLKAEKDGVVQEVSADYITITNDDGTYTTYRLSK
FSRSNQGTSVNQKVVVDEGARIIAGQVLADGPATEEGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
DVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASQGWDVSGLGDEWAQRLQAIGADQVQPRTNVATP
VFDGAREDELAGLLEHTIPNRDGDRMVLPSGKARLFDGRSGEPFPDPISIGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatacgaacaacggcgcaagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaacctgctcgcgctg
cagaccgagagctttgactggctgctcggcaacaccgcctggcagagtcgggtcgaggcg
gctctggagtcgggtcaggacgtccccacgaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgaccttccgcgaccaccgtttc
gagccgccgaagaacagcatcgacgagtgcaaggagcgcgacttcacgttcgccgccccg
ctcttcgtgacggccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgctcgccgggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tccgtcaccgtcctgctcaaggctctcggttggacgaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagccgcccacgcgtgaggctgct
cagacgctgctcgagaacctctacttcaaccccaagcgctacgacctcgcgaaggtcggc
cgctacaaggtgaacaagaagctcggcgcggacgagccgctggacgccggcgtgctcacc
accgacgacgtcatcgccaccatcaagtacctggtgaagctgcacgccggtgagaccgag
acggtcgccgagtcgggccgttcgatcatcgtcgagaccgacgacatcgaccacttcggc
aaccgccgtatccgtaacgtcggtgagctcatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgacgacccaggacgtcgaggcgatcaccccg
cagaccctgatcaacatccgccccgtggtggcgtcgatcaaggagttcttcggtacgtcg
cagctgtcccagttcatggaccagaacaacccgctgtcggggctgacgcacaagcgtcgt
ctgaacgccctcggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgagac
gtgcacccgtcgcactacggccgcatgtgcccgatcgagacccccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcgtacggccggatcaacccgttcggcttcatcgagacg
ccgtaccgcaaggtcgtcgagggcgtcgtcggtgacgacgtcgactacctgaccgccgat
gaagaggaccgcttcgtcatcgcgcaggccaacgcgccgctgaacgacgacttccagttc
gtcgagaaccgcgtgctggtccgccgccgtggcggagaggtcgactacgtgcccggcacg
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gccgtgccgctgattaagtccgaggcgccgctcgtcggcaccggcatggagtaccgctgc
gccaccgacgccggcgacgtgctcaaggccgagaaggacggtgtggtccaggaggtctcc
gcggactacatcaccatcaccaacgacgacggcacgtacaccacgtaccgcctgtcgaag
ttctcccgctccaaccagggcacttctgtcaaccagaaggtcgtcgtggacgagggcgcg
cggatcatcgccggtcaggtcctggccgacggtcccgcgaccgaagagggcgagatggcc
ctcggcaagaacctgctcgtggcgttcatgccctgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctgggcccggaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcg
gacgtcgtcgccggcgacatcctcgtcggcaaggtcacgcccaagggcgagaccgagctg
acgccggaggagcgcctgctgcgcgccatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgtgaagagggcgacgagctgccgccgggcgtgaaccagctggttcgtgtctacgtggcg
cagaagcgcaagatcacggacggtgacaagctcgccggccgccacggcaacaagggcgtc
atctcgaagatccttccgatcgaggacatgccgttcctcgaggacggaactccggtcgac
atcatcctgaacccgctgggtgtgccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccagggctgggacgtctccggcctcggcgacgagtgggcc
cagcgcctccaggcgatcggcgccgaccaggtccagccgcgtacgaacgtcgcgaccccg
gtcttcgacggtgcgcgtgaggacgagctcgcgggtctgctggagcacaccatcccgaac
cgcgacggcgaccgcatggtcctcccgtccggcaaggcgcggctgttcgacggccgctcc
ggtgagccgttcccggacccgatctccatcgggtacatgtacatcctcaagctgcaccac
ctggtcgacgacaagctccacgcccgttcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggccagcgcttcggtgagatggaggtgtgggcg
ctggaggcgtacggcgccgcttacgccctccaggagctgctgacgatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcattcccgagtccttcaaggtgctcatcaaggaaatgcagtccctgtgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgcggcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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integrated database retrieval system
