Streptomyces tabacisoli: ABII15_23050
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Entry
ABII15_23050 CDS
T11033
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stac Streptomyces tabacisoli
Pathway
stac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABII15_23050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stac03021
]
ABII15_23050
03400 DNA repair and recombination proteins [BR:
stac03400
]
ABII15_23050
Enzymes [BR:
stac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABII15_23050
Transcription machinery [BR:
stac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABII15_23050
DNA repair and recombination proteins [BR:
stac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABII15_23050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XCJ72659
UniProt:
A0AAU8IXY4
LinkDB
All DBs
Position
unmamed1:5038948..5039970
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AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtcatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgc
accctcctctcgtcgatccccggcgctgctgtcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggttacgtctccgccgtgcagaacaagcaggtcggtcaggagatcggg
cgcatcccggtcgactcgatctactcgccggttctcaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcggaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccccgtgacgccatggcgtccgccggcaagaccctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcatcgacatgggtccgtccccgacggac
gccgccctggccgccgatctggcgctgccgatcgaggagctcgagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggccaag
ctcgccgggatgggtctggcgctgaaggactcgcctcccgggttcgacccgaccgccgcc
gccgatgccttcggcgcggacgacgacgcggacgcgggcttcgtcgagaccgagcagtac
taa
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