Streptomyces tabacisoli: ABII15_28875
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Entry
ABII15_28875 CDS
T11033
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
stac Streptomyces tabacisoli
Brite
KEGG Orthology (KO) [BR:
stac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stac03032
]
ABII15_28875
03400 DNA repair and recombination proteins [BR:
stac03400
]
ABII15_28875
Enzymes [BR:
stac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABII15_28875
DNA replication proteins [BR:
stac03032
]
Prokaryotic type
DNA Topoisomerases
ABII15_28875
DNA repair and recombination proteins [BR:
stac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABII15_28875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
XCJ73724
UniProt:
A0AAU8IZP9
LinkDB
All DBs
Position
unmamed1:6352201..6354324
Genome browser
AA seq
707 aa
AA seq
DB search
MTAETSVPSTALLTGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDHIEVILHDDGSVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRGGSTHAISFRRGVPGAFSKPGPDAPFD
PAARLSKTKRVPKARQGTRIRYWADRQIFLKDAKLSLENLHQRARQTAFLVPGLTIVVRD
EFGLGEGGSKGEESFRFDGGISEFCEYLAQDKAVCDVLRLTGSGTFKETVPVLDEHGQMT
PTEVQRDLAVDVALRWGTGYDTTVRSFVNIIATPKGGTHVTGFERSLTKTMNEVLRAQKL
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAANRIVANVIAKELKAFLT
STKRDAKAQARSVMEKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVERS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSVSDMLKNVECGAIIQVIGAGS
GRTFDIDAARYGKIILLVDADVDGAHIRTLLLTLFQRYMRPMIEAGRVFAAVPPLHRIEL
VQPKKGQDKYVYTYSDRELRETLLEFQRKGVRYKDSIQRYKGLGEMDADQLAETTMDPRH
RTLRRINIGELEAAEQVFDLLMGNDVAPRKEFISSSAATLDRSRIDA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgaaacgtccgtgccgtccacagcgctgctgaccggagcagaccgggacggt
tccaactacaccgcgcggcacctcctcgtcctcgaggggctcgaggccgtacgcaagcga
ccgggcatgtacatcggctcgaccgacagccgcggtctcatgcactgcctctgggagatc
atcgacaactccgtcgacgaggctctcggtggctattgcgaccacatcgaggtgatcctg
cacgacgacggttccgtcgaggtgcgggacaacggccgcggcatccccgtggacgtggag
cccaagaccggcctctccggggtcgaggtcgtcatgaccaagctccacgcgggcggcaag
ttcggcggcggctcctatgcggcctccggcggtctgcacggcgtgggcgcctcggtggtg
aacgcgctgtcggcgcggctcgacgtcgaggtcgaccgcggcgggagcacgcacgccatc
agcttccggcgcggcgtccccggcgccttctccaagcccggccccgacgcgccgttcgac
cccgccgcgcggctgagcaagaccaagagggtccccaaggcccgccagggcacccgcatc
cggtactgggcggaccgccagatcttcctgaaggacgccaagctctccctggagaacctg
caccagcgcgcccgccagaccgccttcctggtgccggggctcaccatcgtcgtacgggac
gagttcggtctcggcgagggcggcagcaagggcgaggaatccttccgcttcgacggcggc
atcagcgagttctgcgagtacctggcccaggacaaggccgtctgcgacgtcctccgcctg
accgggtcgggcaccttcaaggagaccgtccccgtgctcgacgagcacggccagatgacg
ccgaccgaggtccagcgcgatctcgccgtggacgtcgcgctgcgctggggcaccggctac
gacacgaccgtcaggtcgttcgtgaacatcatcgccacccccaagggcggcacccacgtc
accggcttcgagcgctcgctcaccaagacgatgaacgaggtgctgcgcgcccagaagctg
ctgcgcgtggccgaggacgacatcgtcaaggacgacgccctggagggcctgacggccgtc
gtcacggtgcgtctcgcggagccgcagttcgaggggcagaccaaggaggtcctcggcacc
tcggcggcgaaccggatcgtcgccaacgtgatcgccaaggaactcaaggcgttcctgacg
tccaccaagcgcgacgccaaggcgcaggcccgttccgtcatggagaaggccgtcgccgcg
gcccggacgcgcatcgcggcccgccagcacaaggacgcgcagcgccgcaagacggccctg
gagtcgtcgtcgctgcccgcgaagctcgcggactgccgcagcgacgacgtggagcgcagc
gagctgttcatcgtcgagggcgactcggcgctcggcaccgccaagctggcacggaactcc
gagttccaggcgctgctgccgatccgcggcaagatcctcaacgttcagaagtcgtccgtc
tcggacatgctgaagaacgtcgagtgcggcgcgatcatccaggtcataggagccgggtcg
ggccggaccttcgacatcgacgcggcgcgctacggcaagatcatcctgctcgtcgacgcc
gacgtcgacggcgcccacatccgcacgctgctgctgacgctgttccagcgctacatgcgg
ccgatgatcgaggcgggccgcgtcttcgccgccgtgccgccgctgcaccgcatcgaactg
gtccagccgaagaagggccaggacaagtacgtctacacgtactcggaccgcgagctgcgc
gagaccctgctcgagttccagcgcaagggcgtccggtacaaggactccatccagcgctac
aagggcctgggcgagatggacgccgaccagctggccgagaccacgatggacccgcgccac
cgcacgctgcgccggatcaacatcggcgagctggaggcggcggagcaggtcttcgatctg
ctgatgggcaacgacgtggcgccgcgcaaggagttcatcagcagctccgccgcgaccctc
gaccgctcgcgcatcgacgcctga
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