Streptomyces tabacisoli: ABII15_31950
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Entry
ABII15_31950 CDS
T11033
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stac Streptomyces tabacisoli
Brite
KEGG Orthology (KO) [BR:
stac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stac03021
]
ABII15_31950
Transcription machinery [BR:
stac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABII15_31950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_24
DUF7343
HTH_Crp_2
HTH_23
MarR
MarR_2
HTH_3
GerE
DUF134
DUF7317
DUF4423
Motif
Other DBs
NCBI-ProteinID:
XCJ74304
UniProt:
A0AAU8J1B7
LinkDB
All DBs
Position
unmamed1:7040125..7040943
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AA seq
272 aa
AA seq
DB search
MRTRTDASVHPVKPGQRHPHDDAPDTTEAFTRLCDLPDGPERTALRREVVEAWLPMADRL
AGRFRNRGESLDDLRQVAALGLVKAVDRYDPERGNAFESYAVPTVTGEIKRHFRDHMWTL
HVPRRVQDLRNRVRFAQHELSQTVSGRAPTLSEIADRAGLTEDETRTGLEALESFTALSL
DAELPGSDDGYSLVDALGAADPALDTVVDREAVKPRIAELPEREQRILYMRFFGDMTQSR
IAEQLGISQMHVSRLITRCCDRLRDQVLADAA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacgcgtaccgacgcatccgtgcacccggtcaagccggggcagcggcacccgcac
gacgacgcacccgacaccaccgaggccttcacccggctctgcgacctgcccgacggtccc
gagcgcaccgcgctgcgccgggaggtcgtcgaggcctggctgccgatggccgaccggctc
gcgggccgcttccgcaaccgcggcgagtccctcgacgacctgcggcaggtggccgccctc
ggcctggtcaaggccgtcgaccggtacgacccggagcgcggcaacgccttcgagagctac
gccgtccccacggtcaccggcgagatcaagcgccacttccgcgaccacatgtggaccctg
cacgtaccgcgccgggtccaggacctgcgcaatcgcgtccggttcgcgcagcacgagctc
tcccagaccgtctcggggcgggcgccgaccctgagcgagatcgccgaccgcgccggtctg
accgaggacgagacccgcaccggtctcgaagcgctggagagcttcaccgcgctctccctc
gacgcggagctgccgggcagcgacgacggctactcgctggtcgacgcgctgggcgccgcc
gaccccgcgctcgacaccgtcgtcgaccgggaggccgtcaagccgcgcatcgccgagctg
cccgaacgcgagcagcggatcctgtacatgcggttcttcggcgacatgacccagagccgc
atcgccgaacagctgggcatctcgcagatgcacgtgtcccggctcatcacccggtgctgc
gaccggctgcgcgaccaggtcctcgccgatgcggcgtag
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