Spirosoma taeanense: HNV11_00480
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Entry
HNV11_00480 CDS
T07080
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stae
Spirosoma taeanense
Pathway
stae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HNV11_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stae03021
]
HNV11_00480
03400 DNA repair and recombination proteins [BR:
stae03400
]
HNV11_00480
Enzymes [BR:
stae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HNV11_00480
Transcription machinery [BR:
stae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HNV11_00480
DNA repair and recombination proteins [BR:
stae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HNV11_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Methyltrn_RNA_3
Motif
Other DBs
NCBI-ProteinID:
QJW87952
UniProt:
A0A6M5Y5J2
LinkDB
All DBs
Position
88511..89500
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVVEKADDFHGVFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFP
GVLHEFSSIEGVVEDVTEIILNLKMVRFKKINDMVDNKITVNIKKQSVLKAGDISKFSPS
FEVLNPELEICHIDDTRDLEMEIFVEKGRGYVPADEPRANELPFGHIPIDAIYTPIKNVK
YSVENTRVEQKTDYERLLLDIETDGSIHPEEALKGAAYILIQHFMLFSDQTMTFETAKPE
EENVVDEEVLHMRKLLKTSLADLDLSVRAYNCLKSADVRTLGDLVRLEISDMMKFRNFGK
KSLTELEQLVAEKNLTFGMDVAKYRLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttagcgttccaaatgcccgacaaagtcgtcgtggagaaagccgacgacttt
cacggggtatttgaattcaaaccccttgaaaaaggatacggtgtaacaatcggtaatgcg
cttcggcgaatactgctgtcatcgctggaagggtacgccatcacaagcgtgaagttcccc
ggtgtgttacacgagttctcatccatcgagggcgtagttgaagacgtgacggagatcatc
ctgaatctgaaaatggttcggttcaagaagatcaacgacatggttgataacaagattacg
gtcaacattaagaaacagtctgttcttaaggccggagatatatctaagttctcgccgtcg
ttcgaggtgctgaatcctgagctggaaatctgccacatcgatgatacgcgggatctggaa
atggagatttttgtggagaaaggccggggctatgttccggctgatgaaccacgggcgaac
gaactgccttttggacatattccgatcgacgccatttatacgccgattaagaatgtgaaa
tatagcgtagagaacacacgggttgaacaaaagaccgactatgaacggctgctgctggat
atcgaaactgatggttcgattcatccggaagaagctctgaaaggagcggcctacattctg
attcagcactttatgctgttctctgatcagactatgaccttcgaaacggctaagccggag
gaggagaatgttgttgatgaggaagtactgcatatgcggaaacttctcaaaacatcactg
gctgatcttgacttatctgttcgggcttacaactgtttgaaatcagctgacgtccggacc
ctaggggaccttgttcggctggagatttcagatatgatgaagttccgcaactttggtaag
aagtcgctgacggagttagagcaattagttgctgaaaagaacctgacgttcggtatggac
gttgcaaagtacagattagacgaagattag
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