Spirosoma taeanense: HNV11_05225
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Entry
HNV11_05225 CDS
T07080
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
stae
Spirosoma taeanense
Pathway
stae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNV11_05225 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stae03019
]
HNV11_05225 (rny)
Messenger RNA biogenesis [BR:
stae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HNV11_05225 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4954
Motif
Other DBs
NCBI-ProteinID:
QJW92222
UniProt:
A0A6M5YH26
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Position
complement(1219480..1221084)
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AA seq
534 aa
AA seq
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MPVWLLILATLAGGGIGILIGRQMMAGVRAKHEQEAEEKATAILKNAELQAETIKKDRML
EAKEKYLKLKSEFEETTNQKRNLLLQNETKLKQREQQLNQQAEQQRTRESELNQQRNEIA
QQKNSLSQQIEALNKRREEVDRRQQEADRMLADQVSQLEKIAGLSADQAREQLVENLKAE
AETRASSYIKNIVEEAKLTATKEAKKVVIETIQRTATEHAIENCVSVFNIESDDVKGKVI
GREGRNIRALEAATGVEIIVDDTPEAIIISGFDPVRREIARLSLHRLVQDGRIHPARIEE
IVAKTRKNIEDEIVEIGERTVIDLGIHGLHPELIKMIGRMRFRSSYGQNLLQHSREVAKL
CATMAAELGLNAKLAKRAGLLHDIGKVWPEEAELPHAILGMELAKKYKENPEVINAIGAH
HDEIEMTSMISPIVQVCDAVSGSRPGARREMMESYIRRLKELEELAGNFPGVTKCYAIQA
GRELRIMVDADHVSDERAGVLSYEISQKIEKEMQYPGQIKVTVIREMRAVAYAK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
attccagtttggttattgattcttgctacccttgctgggggtggcataggcatattaatt
ggccgccagatgatggcgggcgttcgtgcgaagcacgaacaggaagcagaggaaaaagca
accgccattcttaaaaatgcggagctgcaggccgagaccatcaagaaagatcggatgctg
gaggccaaagagaagtacctgaaactaaagtctgaatttgaagaaacgacgaatcagaag
cgaaatctactcctccagaacgaaacaaaactcaagcagcgcgagcagcaactcaaccag
caggccgaacagcagcgtacccgcgagagcgaactgaatcagcagcgtaacgaaattgcg
cagcagaaaaacagcctttcgcagcagattgaagcgctcaacaaacggcgcgaagaagta
gaccggcgtcagcaggaagccgatcggatgctggctgaccaggtttctcaactcgaaaaa
attgcgggtctgtcggccgatcaggcacgtgaacagcttgttgaaaacctgaaagccgaa
gccgaaacacgggcatcctcctacatcaagaacatcgttgaagaagccaagctgacggct
accaaggaagccaagaaagtcgttattgagaccattcagcgtacggcaactgaacacgcc
atcgaaaactgcgtgtcggtcttcaacatcgaatccgacgacgtaaaggggaaagtaatt
ggtcgggaaggtcgtaatatccgggcgctggaagccgctacgggtgttgaaatcatcgtg
gacgatacacctgaagccatcatcatttcgggctttgatcccgttcggcgcgagattgcc
cggctgtcgctgcaccggcttgtgcaggacggtcgtattcacccggcccgcattgaagaa
attgtggccaagacccgcaagaacatcgaagacgaaatcgtcgaaattggcgagcggaca
gttatcgacctcggcattcacggccttcatcccgagctgattaagatgatcgggcggatg
cgcttccggtcgagctacgggcagaacctgctccagcactcccgcgaggtagctaaactc
tgtgcgacgatggctgctgaactgggcctgaacgccaagctggccaaacgcgccggattg
cttcacgacattggtaaggtctggcccgaagaagctgaactgccccacgcgattctgggc
atggaactggccaagaaatacaaagaaaatccggaggtcatcaacgcgatcggtgcgcac
catgatgaaatcgagatgacgagcatgatttcgcccatcgtacaggtttgcgacgccgtg
tcgggttcgcggccgggcgcacgtcgcgaaatgatggaatcgtatatccggcgactgaaa
gaactcgaagaactggccggtaatttccccggcgtaaccaagtgctacgccatccaggcg
ggtcgtgagttgcggatcatggtcgatgctgaccatgtttccgacgagcgggcgggtgtt
ctgtcgtacgaaatttcgcagaaaatcgaaaaagaaatgcagtaccccggccagatcaaa
gtgacggtcattcgggagatgcgggccgtagcctacgccaagtaa
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