KEGG   Spirosoma taeanense: HNV11_05225
Entry
HNV11_05225       CDS       T07080                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
stae  Spirosoma taeanense
Pathway
stae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:stae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HNV11_05225 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stae03019]
    HNV11_05225 (rny)
Messenger RNA biogenesis [BR:stae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HNV11_05225 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B DUF4954
Other DBs
NCBI-ProteinID: QJW92222
UniProt: A0A6M5YH26
LinkDB
Position
complement(1219480..1221084)
AA seq 534 aa
MPVWLLILATLAGGGIGILIGRQMMAGVRAKHEQEAEEKATAILKNAELQAETIKKDRML
EAKEKYLKLKSEFEETTNQKRNLLLQNETKLKQREQQLNQQAEQQRTRESELNQQRNEIA
QQKNSLSQQIEALNKRREEVDRRQQEADRMLADQVSQLEKIAGLSADQAREQLVENLKAE
AETRASSYIKNIVEEAKLTATKEAKKVVIETIQRTATEHAIENCVSVFNIESDDVKGKVI
GREGRNIRALEAATGVEIIVDDTPEAIIISGFDPVRREIARLSLHRLVQDGRIHPARIEE
IVAKTRKNIEDEIVEIGERTVIDLGIHGLHPELIKMIGRMRFRSSYGQNLLQHSREVAKL
CATMAAELGLNAKLAKRAGLLHDIGKVWPEEAELPHAILGMELAKKYKENPEVINAIGAH
HDEIEMTSMISPIVQVCDAVSGSRPGARREMMESYIRRLKELEELAGNFPGVTKCYAIQA
GRELRIMVDADHVSDERAGVLSYEISQKIEKEMQYPGQIKVTVIREMRAVAYAK
NT seq 1605 nt   +upstreamnt  +downstreamnt
attccagtttggttattgattcttgctacccttgctgggggtggcataggcatattaatt
ggccgccagatgatggcgggcgttcgtgcgaagcacgaacaggaagcagaggaaaaagca
accgccattcttaaaaatgcggagctgcaggccgagaccatcaagaaagatcggatgctg
gaggccaaagagaagtacctgaaactaaagtctgaatttgaagaaacgacgaatcagaag
cgaaatctactcctccagaacgaaacaaaactcaagcagcgcgagcagcaactcaaccag
caggccgaacagcagcgtacccgcgagagcgaactgaatcagcagcgtaacgaaattgcg
cagcagaaaaacagcctttcgcagcagattgaagcgctcaacaaacggcgcgaagaagta
gaccggcgtcagcaggaagccgatcggatgctggctgaccaggtttctcaactcgaaaaa
attgcgggtctgtcggccgatcaggcacgtgaacagcttgttgaaaacctgaaagccgaa
gccgaaacacgggcatcctcctacatcaagaacatcgttgaagaagccaagctgacggct
accaaggaagccaagaaagtcgttattgagaccattcagcgtacggcaactgaacacgcc
atcgaaaactgcgtgtcggtcttcaacatcgaatccgacgacgtaaaggggaaagtaatt
ggtcgggaaggtcgtaatatccgggcgctggaagccgctacgggtgttgaaatcatcgtg
gacgatacacctgaagccatcatcatttcgggctttgatcccgttcggcgcgagattgcc
cggctgtcgctgcaccggcttgtgcaggacggtcgtattcacccggcccgcattgaagaa
attgtggccaagacccgcaagaacatcgaagacgaaatcgtcgaaattggcgagcggaca
gttatcgacctcggcattcacggccttcatcccgagctgattaagatgatcgggcggatg
cgcttccggtcgagctacgggcagaacctgctccagcactcccgcgaggtagctaaactc
tgtgcgacgatggctgctgaactgggcctgaacgccaagctggccaaacgcgccggattg
cttcacgacattggtaaggtctggcccgaagaagctgaactgccccacgcgattctgggc
atggaactggccaagaaatacaaagaaaatccggaggtcatcaacgcgatcggtgcgcac
catgatgaaatcgagatgacgagcatgatttcgcccatcgtacaggtttgcgacgccgtg
tcgggttcgcggccgggcgcacgtcgcgaaatgatggaatcgtatatccggcgactgaaa
gaactcgaagaactggccggtaatttccccggcgtaaccaagtgctacgccatccaggcg
ggtcgtgagttgcggatcatggtcgatgctgaccatgtttccgacgagcgggcgggtgtt
ctgtcgtacgaaatttcgcagaaaatcgaaaaagaaatgcagtaccccggccagatcaaa
gtgacggtcattcgggagatgcgggccgtagcctacgccaagtaa

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