Spirosoma taeanense: HNV11_12980
Help
Entry
HNV11_12980 CDS
T07080
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stae
Spirosoma taeanense
Brite
KEGG Orthology (KO) [BR:
stae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stae03032
]
HNV11_12980 (topA)
03400 DNA repair and recombination proteins [BR:
stae03400
]
HNV11_12980 (topA)
Enzymes [BR:
stae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HNV11_12980 (topA)
DNA replication proteins [BR:
stae03032
]
Prokaryotic type
DNA Topoisomerases
HNV11_12980 (topA)
DNA repair and recombination proteins [BR:
stae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HNV11_12980 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QJW90224
UniProt:
A0A6M5Y9P7
LinkDB
All DBs
Position
3090392..3093094
Genome browser
AA seq
900 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEGYLGKDFTVKSSFGHVRDLPKDGLAVDVTNGFQPSYEISPDK
KKLISELKSLAKSAEEVWLATDDDREGEAISWHLKEALGLRDNTKRIVFREITKNAILNA
IKSPRTIDVDLVNAQQARRVLDRLVGYELSPVLWRKIKGGSTGLSAGRVQSVALRLVVDR
EREIDKHQSKSSYKVTAQFIVDGNKVLNAELPKNFATSGEARAFLEACIGATFSIKNLET
KPAKKSPAPPFTTSTLQQEASRKLGYSVDRTMRIAQNLYEAGKISYMRTDSTNLSQEAVD
KAKHEIETEFGPKYVQTRQFKTKNESAQEAHEAIRPTNFNDRHAGGDRDQKRLYELIWKR
AIASQMADAQLERTTVTIGIRFAGGTTATVQAHIDDSPFVDTPAPAAKASGSFPGELVAQ
GEVIKFDGFLRVYLESKDDEDDEDAKGMLPPLRIGQDLNLGQMKATEKFTRPQPRYAEAS
LVKKLEEMGIGRPSTYAPTISTIINRGYVIKQDKPGQERKFTEFTLQRNQITETSGKETF
GSEKAKLFPTNTGIVVNDFLVEYFPDIVDFKFTATVEKEFDEIADGRMNWQKMLEEFYGD
FHKNIEEIQGSSVVSFKTGARELGTDPSSGKKVSARLGKYGAYAQIGESTDDEKPQYANL
REGQLIETISLQDALDLFTLPREVGFFEDKPMTIGIGKFGPYVKHDDKYVSLTREDDPYT
ITPERAIELIQQKRAESVSESLGEFEGKLVTTGKGRFGPYVKFEDKYISIPRNESLAGLT
LERAVELIQAKRTAEANKFIKEFPERPEVKIVNGMYGPYLAVGKRNVRIPKDVDAASLTL
EECLKLAGDEPAPAGKTTAKKTTAKATEKAPAKAVAKKTTTASGAGKKATTTRTATAKKK
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaacttagtcattgtggaatcgccggcgaaggcgaaaaccattgaaggctat
ctgggcaaggattttacggtaaagtccagtttcggtcatgtacgcgatctgcctaaagat
gggctggccgttgacgtgaccaatggcttccagccgtcttacgaaatttcgcccgataaa
aagaaactgatcagtgaactgaagtcgctggcaaagtcggccgaagaggtctggctggcg
acggacgacgaccgcgaaggagaagccatttcctggcacttgaaggaagcgctcggcctg
cgggacaatacgaagcggatcgtttttcgggaaatcaccaaaaatgccatcctgaatgcc
atcaaatcgccccgcacgatcgacgtagacctggtgaacgcccagcaggctcggcgcgta
ctcgaccgcctggttggctacgaactgtcgccggtactctggcgcaaaatcaaaggcggc
agtacagggctgtcggcggggcgggttcagtcggtggcgctgcggctcgtggtggaccgg
gagcgcgagatcgacaaacaccagtcgaagtcgtcgtacaaggtgacggctcagttcatc
gtggacggcaacaaagtcctgaacgccgaactaccgaagaactttgcgacttcgggcgaa
gccagagcgtttctggaagcctgcatcggcgccacgttcagcatcaagaatctggaaacc
aaaccagccaagaagtcgcccgcaccgccctttacgacctccacgctgcagcaggaagct
tcacgcaagctgggctactccgtggatcgtacaatgcggatagcgcagaacctgtatgaa
gccggtaagatttcgtatatgcgaactgactcgaccaacctctcgcaggaggccgttgac
aaggcaaagcacgaaatcgaaacggagtttggccccaaatacgtccagacccggcagttc
aagaccaagaatgaatcggcgcaggaggctcacgaagccatccggccaaccaatttcaac
gatcgccatgccgggggcgaccgcgaccagaaacggctctacgagttgatctggaagcgc
gcgattgcctcgcagatggctgacgcccagctcgaacgcacaactgttaccattggtatc
cgcttcgcgggcggcaccaccgctacggtacaggctcacattgacgacagtccgtttgtt
gatacgcccgcaccagccgccaaagccagtggctcgttccctggcgaacttgtggcgcag
ggtgaggtgattaagtttgacggtttcctgcgagtttacctcgaatcgaaagatgacgag
gacgacgaagacgcgaaagggatgctgcctccgcttcgcatcgggcaggacctgaacctc
ggccagatgaaagccaccgagaagttcacccgtccgcagccgcgctacgccgaagcttcg
ctggtgaagaaactggaagaaatgggcattggccgaccatcgacctatgcgccaactatt
tcaaccatcatcaaccggggttacgtcatcaaacaggacaaacccggccaggagcgcaag
ttcaccgagttcacccttcagcgcaaccagatcaccgaaacgagcggcaaggaaaccttc
ggctcggagaaagccaagctgtttccgaccaacacgggtatcgttgtcaatgactttctg
gtcgaatatttccccgacatcgtggacttcaagttcacggcgacggtcgagaaagagttc
gacgagattgccgacggccggatgaactggcagaagatgctggaagagttttacggcgac
tttcacaagaatatcgaagagattcagggctcgtcggtagtatcgttcaagaccggtgcg
cgcgaactgggtactgatcccagctcgggtaagaaggtatccgcccggcttggtaagtac
ggcgcttatgcccagattggcgaatcgaccgacgacgagaagccgcagtatgccaacctg
cgcgaagggcagttgatcgaaaccatctccctgcaggatgcgctcgatttgttcacgctg
ccgcgcgaagtgggtttctttgaagataagcccatgacaatcggcatcggcaagtttggt
ccgtatgtgaagcacgacgacaaatacgtatcgctgacgcgcgaagacgatccatacacg
ataacccccgaacgcgccattgaactcattcagcagaagcgggccgagtcagtgagcgaa
tcgctgggcgagtttgaagggaagctcgttacgaccggcaaagggcggtttggcccttac
gtaaagttcgaagataagtatatctcgattccacggaatgagtcgctggcggggctgacg
ctcgaacgggccgttgagctgattcaggccaagcgcacggccgaagccaataagttcatc
aaagagtttcccgagcgcccggaggtcaagatcgtcaacggtatgtacgggccgtatctg
gccgtcggcaaacgtaacgtccggattcccaaggatgtcgatgcggcttcgcttacgctg
gaggaatgcctgaaactggcgggcgacgagccagccccggcgggtaagacaacggctaag
aaaaccacggccaaagctaccgagaaagcgccggccaaggcagtagctaaaaagaccacc
actgctagtggtgcgggcaaaaaagcgactaccacacgcacggctacggccaagaaaaaa
tag
DBGET
integrated database retrieval system
