Spirosoma taeanense: HNV11_19145
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Entry
HNV11_19145 CDS
T07080
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stae
Spirosoma taeanense
Pathway
stae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNV11_19145 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stae03019
]
HNV11_19145 (recQ)
03400 DNA repair and recombination proteins [BR:
stae03400
]
HNV11_19145 (recQ)
Enzymes [BR:
stae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HNV11_19145 (recQ)
Messenger RNA biogenesis [BR:
stae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HNV11_19145 (recQ)
DNA repair and recombination proteins [BR:
stae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNV11_19145 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
HTH_40
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJW91343
UniProt:
A0A6M5YDH2
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All DBs
Position
4603794..4605953
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AA seq
719 aa
AA seq
DB search
MTPTDALNTAQPRLKEPADYLKRYYGYDRFRPMQEDIIQSVVSGRDTVVLMPTGGGKSVC
FQIPALMLPGVTVVVSPLIALMKDQVEALHLNGISAAYYNSTQTSRAQRDIEDDCISGKL
KLLYVSPEKLLSESFFTFLKRARVSLFAIDEAHCISSWGHDFRPEYTQLNVLKQHFPNVP
TVALTATADKLTRQDIAQRLGMNDPAVFIASFNRTNLSLQVLPGQNRLGQIARLLQQKPD
TSGIIYCLSRKSTESIAAKLQEKGFSAAFYHAGMDPADRARTQEAFLRDDVRIICATIAF
GMGIDKSNVRWVIHYNMPKNIEGFYQEIGRAGRDGAAAQTVLFYSFSDVKTYKEMLAENN
PANLGLQLAKLERMQQYADAHTCRRQILLSYFSEDLPEPCGNCDVCRDPRVTFDGTVLAQ
KALSAMVRTGERVPMNLLIDILRGSRSQAVMQGGYDQIKTYGAGRDLRFEDWRNYLHQLI
NIGVIEIAYDQHYALRRGILADQVLYGGRKIELVRPDDAPKSIVEKPKTKAETSRDDLFE
QLRSLRKQLADEQNVPPYVIFTDTTLEDMARQRPITPDALRNVSGVGERKLQLFGRKFLD
VILDYVRGRVQAGEKPKGSTQLITFDLYNRGMSLDEIATERQLTIGSIANHLVQLAKAGY
DISLEEILASLLTPFERVEIERAIAAVGMPEGRLKAVFDHLGGRYDYARLTLVAGLLDE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgactgacgctctcaacaccgcgcagccgcgtttgaaagaaccggccgattac
ctcaaacgctactatgggtatgaccgcttccggcccatgcaggaagacatcatccagtct
gtggtcagcgggcgcgatacggttgtgctcatgccaacgggtggcggcaagtcagtatgc
ttccagattccggcattaatgctgccgggtgtaacggtggtggtatcgcccctgattgcg
ctcatgaaagatcaggtcgaagccctgcatctgaacggaatttccgctgcttactacaac
agcacccagaccagccgcgcgcagcgcgacattgaggatgactgcatcagtggtaaactc
aaattactgtatgtatcgcccgagaagctgctgtccgagtccttttttaccttcctgaaa
cgagccagggtttcgctgttcgccattgacgaagcgcactgtatttcgtcgtggggccat
gatttccggccggaatacacgcagttgaacgttcttaagcaacactttccgaacgtccca
actgttgccctgacggccacggccgataaactcacccgccaggatattgcccagcggctc
ggcatgaacgatccggccgtttttattgcctctttcaaccgcaccaacctcagcctgcag
gtcctgccgggtcagaaccgccttggccagatcgctcgcttattacagcagaagcccgac
acatcggggattatttactgcctgagccgcaaatcgaccgaatcaatagcggctaaactt
caggaaaaagggttcagcgcggccttctaccacgcaggcatggaccccgccgaccgcgcc
cgcactcaggaagcgttcctgcgcgacgacgttcggattatttgtgccaccatcgccttt
gggatgggcatcgacaagtcgaacgtccgctgggtaattcactacaacatgcccaaaaac
attgaaggcttttaccaggaaattggtcgggcgggccgcgacggcgctgctgcacaaacc
gtcctgttttacagcttcagcgacgtaaagacgtacaaagagatgctggccgagaacaat
ccggctaacctgggtctgcaactggccaagctcgaacggatgcagcagtacgccgatgca
cacacctgccgccgtcagattctcctctcctatttttcggaagatctgcccgaaccctgc
ggcaactgcgacgtctgccgcgacccgcgggtaaccttcgacggtacggtgctcgctcag
aaagctctttcggccatggttcgcacgggcgaacgggttcccatgaatctgctcatcgac
attttgcgcggctcccgcagtcaggcggttatgcagggtggctacgaccagattaaaacc
tacggcgccggacgtgacctgcgctttgaggactggcggaattacctgcaccagcttatc
aatattggcgttatcgaaattgcttatgatcagcattacgccctgcgccggggtattctg
gccgatcaggtgctttacggtggccggaagattgaactggtccgacccgacgacgctccg
aagtcaatcgttgaaaaaccaaaaaccaaagccgagaccagtcgcgacgatctgtttgag
cagctgcgttccctgcgtaagcaactagccgacgagcagaacgtaccgccttacgtcatc
ttcacggacactaccctggaagacatggcccggcagcgacccataaccccggatgccctg
cgtaacgtcagcggggtgggcgaacgtaaacttcaactattcggccggaagtttctcgat
gttatactcgactatgtacggggtcgggtgcaggcgggcgaaaagcctaaaggttcgacc
cagctgattaccttcgatctatacaatcggggtatgagtctggacgagattgcgactgag
cgtcagctcactatcggctctattgcgaaccatctggtgcagttggcaaaagccggttac
gacattagtctggaagaaattttagcctccctccttaccccgtttgagcgggttgaaatt
gagcgggccattgctgcggttggcatgcctgaggggcgtttaaaggccgtttttgatcac
cttggcggacgttatgattatgcccgattaaccctggttgcgggtctgctggacgaataa
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