Spirosoma taeanense: HNV11_22130
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Entry
HNV11_22130 CDS
T07080
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stae
Spirosoma taeanense
Brite
KEGG Orthology (KO) [BR:
stae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stae03009
]
HNV11_22130 (rimO)
Enzymes [BR:
stae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HNV11_22130 (rimO)
Ribosome biogenesis [BR:
stae03009
]
Prokaryotic type
ribosomal protein modification factors
HNV11_22130 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QJW91886
UniProt:
A0A6M5YF01
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All DBs
Position
5324959..5326269
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AA seq
436 aa
AA seq
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MKTKGIRLNKINIVTLGCSKNLVDSEMLYTQLRGNGMDVTHESKKDDANIVVINTCGFID
NAKEESINTILRYVDAKDAGVVDKVYVTGCLSHRYKDELEVEMPTVDAWFGTNELPRLLK
TLRADYKHELVGERLLTTPAHYAYLKIAEGCDRPCSFCAIPLMRGSHISRPIDELLTEAR
SLARRGTKELILIAQDLTYYGLDLYKKRNLADLINQLTDVSGIDWIRLQYAYPSGFPLEV
LDVMRNRPNVCNYLDMPLQTGSTELLKLMRRGITREKTEGLIQTIRERVPNITLRTTLIV
GHPGETNAMFEETYDFVERMRFDRLGVFTYSHEENTHSFSMPDDISDDVKQERADALMEL
QQGISHELNQQKVGRTYKVLFDRKEGGYFIGRTEADSPEVDNEVLVPASQYVRLGDFANV
RIHRAEEFDLYGEVVV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaggaatacgtctaaataaaattaacatcgttacgctcggttgctcaaag
aacctggtggattcggagatgctgtatacgcaactcaggggcaacggcatggacgtaacg
cacgaatcgaagaaagacgacgccaacattgtcgtcatcaatacgtgcggcttcattgac
aatgcgaaagaagagtcaatcaacaccattctgcgttacgttgacgctaaagatgcgggc
gtagttgataaagtgtatgtaacaggctgcctgtcgcaccgttacaaagacgagctggaa
gtcgaaatgccaaccgtagacgcgtggtttgggaccaacgaactcccgcgcctgttaaaa
acgctccgggccgattataagcacgaactggtaggcgaacgtttgctgacgaccccggct
cactacgcttacttaaaaattgcggaaggctgcgaccgtccctgctccttctgtgctatt
ccactcatgcgcggaagccacatttcccggcctatagatgaattgctgaccgaagcccgg
tcgctggcacgacgtggcacaaaagaactgattcttattgcgcaggacctgacctactac
ggactggacctgtataaaaagcggaacctcgcagacctgattaatcaactgaccgatgtt
agtggcattgactggatccgattgcaatacgcctatccatcgggctttccgctggaagtc
ctggacgttatgcgcaaccggccgaacgtctgtaattatctggacatgccgctgcagacc
ggatcaacggaactgctcaagctgatgcgccggggtattacgcgcgaaaagacggagggc
ctgattcagaccatccgcgagcgggtacccaacattaccctgcggacgaccctgattgtt
ggacaccctggcgaaacgaatgcgatgtttgaggaaacctatgatttcgttgaacggatg
cgtttcgaccggctgggcgtgtttacgtattcgcacgaagaaaatacgcactctttctcc
atgcctgacgatatttccgacgacgtaaagcaggaacgagccgacgctctgatggaactt
cagcagggaatatcgcacgaactaaaccagcagaaagtgggccggacctataaagtgctt
ttcgaccggaaagaaggcggttactttatcggacgcaccgaagccgattcgcccgaagtg
gataacgaagttctggttccagccagccagtacgtacgacttggcgacttcgccaacgtc
cggattcaccgcgctgaagagtttgatttatatggcgaggttgtggtttaa
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