Spirosoma taeanense: HNV11_23185
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Entry
HNV11_23185 CDS
T07080
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
stae
Spirosoma taeanense
Pathway
stae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HNV11_23185 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stae03400
]
HNV11_23185 (recF)
DNA repair and recombination proteins [BR:
stae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HNV11_23185 (recF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
AAA_29
ABC_tran
ATPase_2
SbcC_Walker_B
NACHT
AAA_13
DUF2813
VapE-like_dom
AAA_30
cobW
Motif
Other DBs
NCBI-ProteinID:
QJW92071
UniProt:
A0A6M5YFN8
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Position
5576479..5577621
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AA seq
380 aa
AA seq
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MHLEKLSLTNFKNYEDGRYAFGRQVNVIVGPNGSGKTNLLDAIYFLALSKSAFQNQDALS
ILHNADYFILDGIFEEQEQHHVQITISLQRGQRKVVMADKKPYERVSEHIGRFPVVLIAP
NDTDLVREHSEDRRHFFDGVLSQLDAEYLRDYLMYQQVLKQRNSLLKLFAERNQVDNDML
DTYDVPLLEIGQRIHDRRKRFVTEFLPGFRAHYAYLSDEREAVDIVYESEVSDPEFVAEF
RHFRRRDTVLQRTTMGVHKDDYSFRIGGRDADTTSSSSPGLFSSEPIPLKKFGSQGQQKT
FVIALKLAQFDQLEARKNIKPILLLDDIFDKLDDRRIGKLIQRMDEGDFGQLFITDARPE
RTRELLKRVKADVRFFETGS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcgaaaagctgagcctaaccaattttaaaaattacgaagatggccggtatgcg
tttgggcggcaggtaaacgtaatcgttggaccaaatggcagcggcaaaaccaacctgctg
gacgccatttattttttagcgctgagcaaaagtgcctttcagaatcaggatgcgctgagc
attctgcacaatgccgattattttatcctcgacggtatttttgaggagcaggagcagcat
cacgttcagattacgattagtctgcagcgaggacagcgtaaggtcgttatggccgataag
aagccctatgaacgggtgagtgaacacattggccgcttcccggtcgtgttgatagctcct
aatgacactgacctggtgcgtgaacatagcgaagaccggcgacattttttcgacggggtt
ctgtcgcagcttgatgccgaatacctgcgcgattacctaatgtatcagcaggttctgaaa
caacggaatagtcttctgaaactatttgccgagcgcaaccaggtggataatgacatgctg
gatacgtatgatgtgccgttgctggagattggtcagcggattcatgaccggcgtaagcgg
ttcgtgacggaatttttgcctggttttcgggcgcattatgcctatctgagcgacgagcgc
gaggctgttgatattgtatatgaatcggaggtgagcgatccagaattcgttgctgaattt
cggcacttccggcgtcgtgatacggtcctgcaacgaacaacgatgggcgttcataaagat
gattacagctttcggattggtggtcgcgacgccgatacaacctcttcttccagccctgga
ctttttagctctgaaccaattccattaaaaaaattcgggtcgcaggggcagcaaaaaacg
tttgttattgcgctgaaactggcgcagttcgaccagctcgaagcccgaaagaacattaag
ccgattttattgctggatgatattttcgataagctggacgaccgacgtattggaaaactt
attcagcgcatggatgagggcgactttggccagttgtttattaccgatgcccgacctgag
cgcacccgcgagcttttgaaacgggtgaaagccgacgtgcggtttttcgagacgggcagt
taa
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