Streptococcus tangpeifui: ACFSN5_01420
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Entry
ACFSN5_01420 CDS
T11203
Symbol
rnjA
Name
(GenBank) ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
stag Streptococcus tangpeifui
Pathway
stag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFSN5_01420 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stag03019
]
ACFSN5_01420 (rnjA)
Messenger RNA biogenesis [BR:
stag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACFSN5_01420 (rnjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
SIS_2
ODP
Permuted_GreAB-C
Motif
Other DBs
NCBI-ProteinID:
XJW02109
LinkDB
All DBs
Position
complement(271711..273402)
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AA seq
563 aa
AA seq
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MSTINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVENVDRIKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLLRDAK
LYEINDNTKLTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGQPADL
HRMAAIGDDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIGDIHGRIIFASFASNIFRL
QQAAEAAVKNGRKIVVFGRSMEKAIVNGIELGYIKVPDGTFIEPNELKDYHASEIMIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG
KINNIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHAGLAEDTGIPRENIFIMEN
GDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFKTK
MILAGPDILSRGFVYMRESGDLIRQGQRILFNAIRIALKNKEASIQSVNGAIVNALRPFL
YEQTEREPIIIPMILTPDKNNDK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactatcaatttaaaacccgaagaagtcggagtttatgctataggcggactgggg
gaaattggtaaaaatacctatggtatcgaataccaagatgaaattatcatcgtcgatgcc
ggtatcaagttcccagaagatgaccttcttggtatcgactatgttattcccgactattct
tatatcgttgaaaatgttgatcggattaaagccttggtcataacccatggacatgaggat
cacattggaggaatccctttcctgctcaagcaggccaatattcctatctatgctggccct
ttggctttagccctcattcgcggaaagttagaggaacatggtctcctgcgcgatgctaaa
ctgtatgaaatcaatgataacactaaattaacttttaaaaatctcagtgtcaccttcttc
cgaacaactcactcaattccagaacctctaggaattgtcatccacacgccccaaggcaaa
attgtctgtaccggtgactttaagtttgattttacgcctgttggtcaaccagctgacctt
caccgtatggctgccatcggtgacgatggcgttctctgccttctatcagactctaccaat
gcggagattccaacttttactaattcggaaaaagttgtcggtcaatccattatgaaaatt
attggggatatccacggtcgaattatctttgcttccttcgcttccaatattttccgtctg
cagcaggctgcagaagccgccgttaagaacggccgtaagattgttgtttttggtcgctct
atggagaaggctatcgtcaatgggattgaactgggctatatcaaagtgcctgatggaacc
ttcattgaaccaaatgaactcaaagattaccatgccagcgaaattatgattatgtgtacc
ggcagtcaaggggaatctatggctgccttagctcggattgccaatggtacccatcggcaa
gtcactttacaacctggggacacggtcattttctcgtctagcccaattccaggcaataca
accagcgtcaacaagctgattaacactattcaggaagctggtgtggatgttatccatggt
aagattaataatattcacacttctggacacggcggccaacaagagcaaaaactcatgctc
cgtctgattaaaccaaaattctttatgcccgtccatggcgagtatcggatgcaaaaggtc
catgctggattagccgaagatacgggtatcccaagagagaatatttttatcatggaaaat
ggggatgtccttgccctgactaaagattctgctcgtcgtgccggacatttcaatgctcaa
gacatctatgttgatggtaatggtatcggtgatattggtactgcagttcttcgggatcga
cgggatctctcagaagatggggtcgttttagcagtcgctaccgttgattttaagaccaag
atgattttggcaggaccggatattcttagccgaggtttcgtctatatgcgagaatcaggg
gatttgattcgtcaaggccaacgtatcctcttcaatgctattcggatcgcccttaagaat
aaagaggccagtatccaaagcgttaatggagctatcgtcaatgccctgaggcccttcctc
tacgagcaaacagaacgtgaacctatcattattccaatgattctaacaccagacaaaaat
aacgataaatag
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