Streptococcus tangpeifui: ACFSN5_07250
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Entry
ACFSN5_07250 CDS
T11203
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
stag Streptococcus tangpeifui
Pathway
stag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFSN5_07250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stag03019
]
ACFSN5_07250
03009 Ribosome biogenesis [BR:
stag03009
]
ACFSN5_07250
Enzymes [BR:
stag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACFSN5_07250
Messenger RNA biogenesis [BR:
stag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACFSN5_07250
Ribosome biogenesis [BR:
stag03009
]
Prokaryotic type
rRNA helicases
ACFSN5_07250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XJW01305
LinkDB
All DBs
Position
complement(1580625..1582181)
Genome browser
AA seq
518 aa
AA seq
DB search
MKFTELNLAENILQAVEKAGFVEPSPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIDTANNVIQALVIAPTRELAVQSQEELFRFGREKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRRALKLNTVETLILDEADEMLNMGFLEDIEAIISHVPNERQTLLF
SATMPDAIKRIGVKFMKDPEHVKIAAKELTSDMVEQFYVRVKEREKFDTMTRLIDVEQPE
LSIVFGRTKRRVDELTRGLKLRGYRAEGIHGDLDQNKRLRVIRDFKNDNLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVSPNEMGYLSIIENLTKK
RMKGLKPATADEAFQAKKQVALKKIERDFADDSIRSNFDKFKGDAVKLAAEFSPEELALY
ILSLTVQDPETMPEVEISRERPLPFKPSGSNHGKGGRSNKRRGSRDRYRRDNTGNSRREF
KRKSNKNFKDFDKKDNKRPHRTSSEKKNGFVIRNKGDR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaattaaacttagcagaaaatattctgcaggctgttgaaaaagcaggt
ttcgttgaaccctctcctattcaggagatgactattcccttggctcttgaaggcaaagat
gttatcggccaagcgcagacagggactggtaaaacggcagctttcggcctgccaacctta
aataagattgacactgctaataatgtcattcaagctttagttattgcgccaacacgggaa
ttggccgttcaaagtcaggaagagctcttccgttttggccgcgaaaagggtgtcaaggtt
cgctcagtttacggtgggtcaagcattgaaaagcaaattaaggctctgcgttcaggtgcc
catatcgtagttggtacaccagggcgtctgctggacttgatcaaacgtcgagctcttaag
ctcaatacagttgagaccttaattcttgacgaagccgatgaaatgcttaatatgggcttt
ttggaagatattgaagccatcatcagccatgtgccaaacgaacgccaaaccctgctcttc
tcggctaccatgccagatgcgattaaacgtattggtgtgaagtttatgaaagatcctgag
catgtcaaaattgcagctaaggaactaaccagcgatatggttgagcagttctacgttcgc
gttaaagagcgggaaaaatttgataccatgactcgtttgattgatgtcgaacagcctgag
ctatctattgtctttggtcggactaaacggcgggtagatgaattgactcgcggtctcaaa
ctgcgaggctaccgggcagaaggtatccatggagatttggatcaaaacaagcgtttgcga
gtcatccgcgactttaaaaatgataatctagatattctagtagcgaccgatgtagctgca
cgtggactcgatatttcaggcgtgacccatgtctacaactacgatattccgcaagatccc
gagagctatgtccaccgcatcgggcgaactggccgtgcaggtaaatcaggtcaatccatc
acttttgtctcacctaatgaaatgggttacctttctatcattgaaaatctaaccaaaaag
cgcatgaagggccttaaaccggcaactgcagacgaagcctttcaagctaagaaacaggtt
gctctcaagaagattgagcgtgactttgccgatgatagcatccgctctaactttgataaa
tttaaaggagatgcggtcaaactggctgctgaattttcaccagaagaactggccctctat
atcctgtccttaacggtacaagatccagaaacgatgccagaggtagaaatcagccgtgaa
agaccgctgccatttaaaccctcagggtctaatcatggcaaaggcggccgcagtaacaag
cgtcgtggtagccgcgatcgctaccgccgtgacaacactggcaatagccgtcgtgaattt
aaacgcaagtctaataagaactttaaagattttgataaaaaggacaacaaacggccgcat
cgcacatcaagtgaaaagaaaaatggcttcgttatccgcaataagggtgaccgctaa
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