Spiroplasma taiwanense: STAIW_v1c00100
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Entry
STAIW_v1c00100 CDS
T02742
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
stai
Spiroplasma taiwanense
Pathway
stai03030
DNA replication
stai03430
Mismatch repair
stai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STAIW_v1c00100 (holB)
03430 Mismatch repair
STAIW_v1c00100 (holB)
03440 Homologous recombination
STAIW_v1c00100 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stai03032
]
STAIW_v1c00100 (holB)
03400 DNA repair and recombination proteins [BR:
stai03400
]
STAIW_v1c00100 (holB)
Enzymes [BR:
stai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STAIW_v1c00100 (holB)
DNA replication proteins [BR:
stai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STAIW_v1c00100 (holB)
DNA repair and recombination proteins [BR:
stai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STAIW_v1c00100 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
UvsY
COBRA1
RabGap-TBC_2
Motif
Other DBs
NCBI-ProteinID:
AGR40707
UniProt:
S5LYJ0
LinkDB
All DBs
Position
11916..12662
Genome browser
AA seq
248 aa
AA seq
DB search
MEKEKLFELLNNLISANKMYHSIIVVNTNQNLLEEISIEISRQIFCENKALSNDNCKWCI
KSYNKNNLNIFFIGDGTNQISKVEIKDLIIKFSSSALENNINKIYIIKNAEQLNEFAANS
LLKFLEEPPKNTYAILLSNDKNQILSTIKSRCKIFSIFSQKNNLDQLNDFFDLFLEKNKE
NLLLYLIELKQKEKFEIVQILENTFNKSINLLNSNIHEILLDALTEIKTSNHINLILENL
FIKIHEVI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaaactatttgaattactaaataatttaatttctgcaaataaaatgtat
cattcaataatagttgtaaatactaatcaaaatttattagaggagatttcaattgaaata
tcaagacaaatattttgtgaaaataaagcattatcaaatgataattgtaaatgatgcatt
aaaagttataataaaaataatttaaacattttttttattggggatggaactaatcaaatt
tcaaaagtagaaattaaagatttaataattaaattttcttcttcagcattagaaaataat
attaataaaatttatataataaaaaatgcggaacaactaaatgaatttgcagcaaattca
cttttaaaatttttggaggaaccacctaaaaacacttatgctattttattgagcaatgat
aaaaatcaaattttatctactataaaatcccgttgtaaaatatttagtattttttctcaa
aaaaataatcttgatcagttaaatgatttttttgacttatttttggaaaaaaataaagaa
aatcttttgctttatttaatagaattaaaacaaaaagaaaaatttgaaatagttcaaata
cttgaaaatacttttaataaaagtataaatttgttaaattcaaatattcatgaaatttta
ttagacgctttaactgaaataaaaacttcaaaccatataaatctaattttggagaatcta
tttattaagattcatgaggtaatataa
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