Spiroplasma taiwanense: STAIW_v1c00640
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Entry
STAIW_v1c00640 CDS
T02742
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
stai
Spiroplasma taiwanense
Pathway
stai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STAIW_v1c00640 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stai03400
]
STAIW_v1c00640 (uvrB)
DNA repair and recombination proteins [BR:
stai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STAIW_v1c00640 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STAIW_v1c00640 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA_19
AAA_7
AAA_22
AAA_30
DUF87
TrwB_AAD_bind
Cas3-like_C_2
AAA_25
HerA_C
AAA_14
PIF1
AAA_16
UB2H
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
AGR40759
UniProt:
S5LSW4
LinkDB
All DBs
Position
63714..65699
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AA seq
661 aa
AA seq
DB search
MKKEFKKFNLVTEFTPGGDQPKAIKDLIEGIKANKKHQVLMGATGTGKTFTMANIIKDLN
KPTLVLAHNKTLAMQLYIELKELFPNNRVEYFVSNFDFYQPEAYIPSRDLYIDKDAKRNN
DLEMMRLSAMNALMIRQDTIVVASVAAIYATQDPKEYGNVFFELNVGQILSKKQLLTFLI
QTGYTRNETNLDMGCFSAKGDVIKIAPSWTDKFNLRISMFGDEIESLDLIDVLNNTVEER
LHMFTIFPAAAYVTNFDKMKLVVENIEKELILRVKELEKEGKLIEADRLTKRTKYDMETL
TEFGICSGIENYSAHLDFRPKGVPPFSLIDYFGDDFLTIIDESHMMIPQIRGMFNTDRSR
KETLVAHGFRLPSALDNRPLNFEEFAGKLKNVIYTSATPGDYELNLVENKVVEQIIRPTG
LIDPIIEIRGTMNQMNEIVQNVNQIVEKKQKVFITTLTIRASEDITTYLQSRSIKVAYLH
SELKTLERNQILIDLRKGVYDVIVGVNLLREGLDIPEVSLVCILDADKQGFLRNTRSLIQ
TVGRAARNAEGRVIFYADSVSPAMKEAIEETDRRRNIQIEYNLKNNIIPKTITKKISDFG
MDINIRNKIDELSKLNKKDKIKNKEKLIEDLRKQMLFAAKEQNYEKAAELRDLILEIQSE
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagagtttaagaaatttaatttagtaactgaatttactccaggtggtgatcaa
ccaaaagctataaaagatttaattgagggtattaaagcaaataaaaaacatcaagtttta
atgggagctactggtacaggtaaaacatttacaatggcaaatattataaaagatttaaat
aagcccactttagttttagcacataataaaacattagcaatgcaattgtacatagaatta
aaggaattgttcccaaataatagagtggaatattttgtttctaattttgatttttatcaa
ccagaagcttatattccttcaagagatttatatattgataaagatgcaaaaagaaataat
gatttggaaatgatgagattaagtgcaatgaatgcattaatgattagacaggatacaatt
gttgttgctagtgttgctgcaatttatgcaactcaagacccaaaagaatatggaaatgtt
ttttttgaattaaatgttgggcaaattctttcaaaaaaacaattattaacttttttaatt
caaactggttatacaagaaatgaaacaaacttagacatgggatgttttagtgcaaaaggt
gatgtgataaaaattgcaccaagttgaacagataaatttaatttaagaatttcaatgttt
ggagatgaaattgaatcattagatttaattgatgttctaaataatacagttgaagaaaga
ttacatatgtttacaatttttccagctgcagcttacgttacaaattttgataaaatgaaa
ctagttgttgaaaatatagaaaaagagttaatattaagagttaaagaattagaaaaagaa
ggaaaacttattgaagcagatagacttacaaaaagaactaaatatgatatggaaacatta
acagaatttggaatttgtagtggaattgaaaattactcagcacatttagattttagacca
aaaggagttcctccattttcattaattgattattttggagatgattttttaacaataatc
gatgaatcacatatgatgatccctcaaattagaggaatgtttaacacagatagaagtaga
aaagaaacattagttgcgcacggatttagattaccaagcgctttagataacagaccactt
aattttgaagaatttgcaggtaaattaaaaaacgtcatttatacttcagcaactcctgga
gattatgagttaaatttagtagaaaataaagttgtagagcaaataattagaccaactggc
ttaattgatccgattattgaaataagaggaacaatgaatcaaatgaacgaaatagttcaa
aatgtaaatcaaattgttgaaaaaaaacaaaaagtatttattacaactttaactattaga
gcttcagaagatattacaacttatttacaatcaagaagtataaaagtagcatatttacac
tcagaattaaaaactttagaaagaaatcaaatattaatagatttaagaaaaggggtttat
gatgtaattgtaggagtaaatttactaagagaaggattagacattccagaagtaagtttg
gtttgcattttggatgcagataaacaaggttttttaagaaatacaagaagtttaattcaa
actgttggacgagcagcaagaaatgctgaaggaagagttattttttatgctgattcagtt
tcacctgctatgaaagaagcgattgaagaaacagatagaagaagaaatattcaaatagaa
tataatttaaaaaataatattattccaaaaactattactaaaaaaataagtgattttgga
atggacataaatattagaaataaaattgatgaattatcaaaattaaataaaaaagataaa
ataaaaaataaggaaaaattaattgaagatttaagaaaacaaatgttgtttgcagcaaaa
gaacaaaattatgaaaaagcagcagaattaagggatctaatattagaaattcaatcagag
gagtaa
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