Spiroplasma taiwanense: STAIW_v1c01040
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Entry
STAIW_v1c01040 CDS
T02742
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stai
Spiroplasma taiwanense
Pathway
stai03420
Nucleotide excision repair
stai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STAIW_v1c01040 (pcrA)
03430 Mismatch repair
STAIW_v1c01040 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stai03400
]
STAIW_v1c01040 (pcrA)
Enzymes [BR:
stai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STAIW_v1c01040 (pcrA)
DNA repair and recombination proteins [BR:
stai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STAIW_v1c01040 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
STAIW_v1c01040 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AGR40794
UniProt:
S5LSY9
LinkDB
All DBs
Position
108823..110991
Genome browser
AA seq
722 aa
AA seq
DB search
MNDLLKQLNDEQLDSVITTDVPLIIIAGAGSGKTRVITYKIAYLIEKLNILPYKILAVTF
TNKAAQEMKQRIGNILPNLESKPLISTFHSLCVRILREDGEYIGLEKNFTIIDSSDQFKI
VRQIMKDLGIDIEKEKVERKIILKISKWKNSFTPWENAFAETFKLEEKKWAKVYRDYEAF
LLKKKFLDFDDLILKVHKLFLKNLNVQRKWRNKFDYVLVDEFQDTNYAQFDLIKGLVGSK
NNLTVVGDSDQTIYSWRGAKVNIILNFNKEFRNARTIVLNENYRSTKSILDLANNFIENN
KNREKKDIFTKKDAGEMVYLKEAASRNFEAKYVALKIKELIKQKNYNYSDFFVLFRMNAW
LPEFEKEFQNYKIPFQLIGGFQFRERKIIKDITALLKVVALKNDIALERVLAFTPKVGAV
TIDKLFKAASENNVSLFDFLLYDQEKVLQISKNLKDLIFCLLKGRQLFEKNSKIVDIAQT
LVAISGYNDRLDLKIKEDEEALQNLKAYYDKMEKFDFEYETEKNSENRLILFLQNEALTN
VQDDLKSINKVALLTIHAAKGLENKIVFIVGLNKDVFPSKMSFNSIDQLEEERRAFYVAI
TRAQELLYISYVTGGYSYISNGELGASRFISELDPNLYEIEKNIYFHSLTEKSSSFKGNG
SLLIKKQEKYEAGVVKGDKINHMMFGEGIVVKVVDKFISVAFSNPTYGVKSLPIKTNAWE
KM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatttattaaaacaattaaatgatgagcaattagattcagtaataacaacagat
gttcctttaataattatagcaggagctggaagtggaaaaacaagagttattacatataaa
attgcatatttaattgaaaaattaaatattttaccatataaaattttagctgttactttc
acaaataaagcagctcaagaaatgaaacaaagaatcggaaatattttacctaacttagaa
agtaaacctttaatttcaacttttcattctctttgtgtaagaattttaagagaagatgga
gaatatattggtttagaaaaaaattttactattattgattcaagtgatcagtttaaaatt
gtaagacaaataatgaaagacttaggaattgatatcgaaaaagaaaaagtagagagaaaa
attattttaaaaataagtaaatgaaaaaattcatttacaccatgagaaaatgcatttgct
gaaacattcaaacttgaagaaaaaaaatgagcaaaagtttatagagattatgaagccttt
ttattaaagaaaaaatttttagattttgatgacttaattttaaaggtacataaattattt
ttaaaaaatttaaatgtacaaagaaaatgaagaaataaatttgattatgtgttagttgac
gaatttcaagatacaaattatgctcaatttgatttaataaaaggcttggtaggtagtaaa
aataatttaactgtagttggtgattcagatcaaacaatttattcttgaagaggagcaaaa
gttaatataattttaaattttaataaagaatttagaaatgcaagaacaattgtattgaat
gaaaattatagatcaacaaaatcaattttggatttggcaaataattttattgaaaataac
aaaaatagagaaaagaaagatatttttactaaaaaagatgcaggagaaatggtttattta
aaagaagctgcttcaagaaattttgaagcaaaatatgtagcattaaaaattaaagaatta
ataaaacaaaaaaattataattattctgatttttttgtcctatttagaatgaatgcttga
ttaccagaatttgaaaaagaatttcaaaattataaaattccttttcaattaattggtggg
tttcaatttagagaaagaaaaattattaaggatataacagcattattaaaagtagtagct
ttgaaaaatgatattgcgttagaaagagttctagcttttacaccaaaagttggagctgtt
acaattgataaattatttaaagctgctagtgaaaataatgtaagtctttttgatttttta
ctatatgaccaagaaaaagtattacaaatctcaaaaaacttaaaggatttaattttttgt
cttttaaaaggaagacagctatttgaaaaaaatagcaaaatagttgatattgcacaaaca
ttagtagcaataagcggatataatgacagattagatttaaaaataaaagaagatgaagaa
gcattgcagaatttaaaagcatattatgataaaatggaaaaatttgattttgaatatgag
actgaaaaaaattcagaaaatagattgattttatttttacaaaatgaagcacttacaaat
gtacaagatgatttaaaatcaattaataaagttgctttattgacaattcatgcagctaaa
ggtttagaaaataaaattgtttttattgtaggtttgaacaaagacgtatttccatcaaaa
atgagctttaattcaattgatcagttagaagaagaaagaagagctttttatgttgctata
actagagcacaagaactattatatatttcttatgtaactggtgggtattcatatatttca
aatggagaacttggcgcctcaagatttatttcggaattggatccaaatttatacgaaata
gagaaaaatatatattttcattcattaacagaaaaatcaagtagttttaaaggaaatggt
agtttattaattaaaaaacaagaaaaatatgaagcaggagttgttaaaggcgataagatt
aatcatatgatgtttggggaaggaatagttgttaaagttgtagacaaatttatttcagtt
gccttttcaaatccaacttatggtgttaaatctttaccaattaaaacaaatgcatgagaa
aaaatgtaa
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