Spiroplasma taiwanense: STAIW_v1c03950
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Entry
STAIW_v1c03950 CDS
T02742
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
stai
Spiroplasma taiwanense
Brite
KEGG Orthology (KO) [BR:
stai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stai03019
]
STAIW_v1c03950
03009 Ribosome biogenesis [BR:
stai03009
]
STAIW_v1c03950
Enzymes [BR:
stai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STAIW_v1c03950
Messenger RNA biogenesis [BR:
stai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STAIW_v1c03950
Ribosome biogenesis [BR:
stai03009
]
Prokaryotic type
rRNA helicases
STAIW_v1c03950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
PhoH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AGR41045
UniProt:
S5MGS0
LinkDB
All DBs
Position
389511..390878
Genome browser
AA seq
455 aa
AA seq
DB search
MKFSDFGFKKFINDALEEIDFIYPTSIQEKVIPLIKKHKSVIAQSHTGTGKTHSFLLPIL
NNINYEVDNKIQCVIITPTRELARQILDNTKDLLKFNSNGNVSLFIGGDDIEKQKDNLKN
KQPMIVIGTPTRLKKLYEENFLQLTTTKYLVIDECDMIFDLGFIDEVDFLISKINKDVNI
SLFSATINNSIKPFLRKYLSNSIFIENIDKNPTNKNIEHVLIWTRNKENKEILNILVNKI
NPYVCMIFLNRKDKIKEIVSWLNDFGIKNVGELHGGLDPRQRSNMQKRIQNMEFKWIVAS
DVAARGIDIDGVSQIISIDLPNDLDYYIHRSGRTGRKEYSGQSYVLFNSTNQHLVDELKS
KNITFTNFKLSNNELVEIIDKTKKKEYIASLPVNVETNKIVNKYKSKKVKPGYKKKRKAE
IEKVKKDIRRKHIKESIAKIKKEKYKKRREELFDN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcagattttggttttaaaaaatttattaatgatgctttagaagaaattgat
tttatttatcctacatctattcaagaaaaagttatacctctaattaaaaaacataaatca
gttattgcacaatctcatacaggtacaggtaaaacgcattcttttttattgccaatttta
aataatattaactatgaagttgataataaaattcaatgtgtaattataactccaacaaga
gaattggcaaggcaaatacttgataatacaaaagatttattaaaatttaattcaaatgga
aatgtttcattattcattggtggagatgatattgaaaaacaaaaagacaatttaaaaaac
aagcagccaatgattgttattggaactccaacaagattaaaaaaactttatgaagaaaat
tttcttcaattaacaacaacaaaatatttagtaattgatgaatgtgatatgatttttgat
ttaggttttattgatgaagtagattttttaatttcaaaaattaataaggatgttaatatt
tcattattttctgcaacaattaataattctattaagccatttttaagaaaatatttatca
aattcaatttttattgaaaatatagataaaaatcctacaaataaaaatatagaacatgtt
ttaatttgaacaagaaataaagaaaataaagaaattttaaatattttggtaaataaaatt
aatccatatgtttgtatgatttttttgaatagaaaagataaaattaaagaaatagtttct
tgattaaatgattttggaataaaaaatgtgggggaattacatggtggcttagatccaaga
caaagaagcaatatgcaaaaaagaattcaaaatatggaattcaaatgaattgttgcaagt
gatgttgctgctaggggaattgatattgatggagtaagccaaattatttcaattgattta
ccaaatgaccttgattattatattcacagaagtggaagaacaggtagaaaagaatattct
ggtcaaagttatgttttatttaattcaacaaatcaacatttagtagatgaattaaaatcg
aaaaatataacttttacaaattttaaattatcaaacaatgaattggttgaaatcattgat
aaaacaaagaaaaaagagtacattgcaagtttacctgtaaatgttgaaacaaataaaatt
gttaataaatataaaagtaaaaaagtaaaacctggttataagaaaaagagaaaagctgaa
attgaaaaagtaaaaaaagatattagaagaaaacacataaaagaatcaattgcaaaaatc
aaaaaggaaaaatacaaaaaacgtagagaagaactatttgacaattaa
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