Spiroplasma taiwanense: STAIW_v1c05890
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Entry
STAIW_v1c05890 CDS
T02742
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
stai
Spiroplasma taiwanense
Pathway
stai03030
DNA replication
stai03430
Mismatch repair
stai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STAIW_v1c05890 (holA)
03430 Mismatch repair
STAIW_v1c05890 (holA)
03440 Homologous recombination
STAIW_v1c05890 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stai03032
]
STAIW_v1c05890 (holA)
03400 DNA repair and recombination proteins [BR:
stai03400
]
STAIW_v1c05890 (holA)
Enzymes [BR:
stai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STAIW_v1c05890 (holA)
DNA replication proteins [BR:
stai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STAIW_v1c05890 (holA)
DNA repair and recombination proteins [BR:
stai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STAIW_v1c05890 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF4522
Motif
Other DBs
NCBI-ProteinID:
AGR41211
UniProt:
S5LX61
LinkDB
All DBs
Position
569371..570321
Genome browser
AA seq
316 aa
AA seq
DB search
MIFVQSKDDFLVKKQVNKLIEKININNQYEIYEYSLIDDSVIKILEEIKTYSFFSNKKII
IINDCWFVNESKIKLHKDFDIKYIEEIFNIKNTEVEIIMSLNSEKFSKKLKIAKLTEQNV
RLFKIELPTYNQKKDIFIRKMQKANIDFDHKSVDLFIEKIPESMQIFSNEIDKLLSLNKY
IDNNLIEEIVSKYYSYDTFEIANCFISNDISNFLTQWSSYKQMNNDIFSFIALLSSNFIL
LRNILLCKKLNYSNNEIFSKLNVNPYRMTKLLEKNRLNIEQINDKIKVMYSLEKNIKNGK
YDSKVIPEIKFLKMFF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatatttgttcaatcaaaagatgattttttagtaaaaaaacaagtaaataaattaatc
gaaaaaataaatattaacaatcaatatgaaatttacgaatactcattaattgatgattca
gtaattaagattctggaagaaattaaaacatattcatttttttcaaataaaaaaataata
ataattaatgattgttgatttgttaatgaaagtaaaattaaattgcataaagattttgat
attaaatatattgaagagatttttaatatcaaaaatactgaagtagaaataatcatgtct
ttaaattctgaaaaattttcaaaaaaattaaagattgcaaaacttacagaacaaaatgtt
agattatttaaaattgaattgcctacatataatcaaaagaaagacatttttataagaaaa
atgcaaaaagcaaatattgattttgatcataaatcagttgatttattcattgaaaaaata
ccagaaagtatgcaaattttttcaaatgaaattgataaattattatcattaaataaatac
attgataataatttaattgaagaaattgtttcaaagtattatagctatgatacatttgaa
attgcaaattgttttatttcaaatgacataagtaattttttaactcaatgaagttcttat
aagcaaatgaataatgatattttttcatttatagcattgttatcaagtaattttatttta
ttaagaaatattcttttatgtaaaaaattaaattattcaaataatgaaattttttcaaaa
ttaaatgtaaatccatatagaatgacaaaattattggaaaaaaatagattaaatatagag
cagataaatgataaaatcaaggtgatgtattctttagaaaagaacattaaaaatggaaaa
tatgatagcaaagttattcctgaaattaaatttctaaagatgtttttttaa
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