Stanieria sp. NIES-3757: STA3757_04060
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Entry
STA3757_04060 CDS
T05130
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
stan
Stanieria sp. NIES-3757
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stan03400
]
STA3757_04060
Enzymes [BR:
stan01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
STA3757_04060
DNA repair and recombination proteins [BR:
stan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
STA3757_04060
Prokaryotic type
STA3757_04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Arnt_C
Motif
Other DBs
NCBI-ProteinID:
BAU63051
LinkDB
All DBs
Position
complement(445710..447137)
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AA seq
475 aa
AA seq
DB search
MTSLILFWHRRDLRITDNIGLAAARQQSPKVVGVFCLDENLLARDDIAPARVTYMMGCLQ
QLQQSYQQVGSQLLIIKGKPTQAIPKLAETLQAKAVFWNWDVEPYAQTRDRKVKEALTAK
GIEVSNHWDQLLHAPGEILTKSSQQPYTVYTPFWKNWIEQKKRAAIVKLDQFENLTAEEL
HQAQQAGVIDLPTAKDLGYVWDNPLILAPGKTAAKERLAEFCSRAINEYDEQRNYPAIDG
TSQLSAALKFGAIGIRTVWEASVEAYENCRSDETRNNIRSWQQELAWREFYQHCMYFFPE
LEQGAYRREFKNFPWENNEDYFQAWCEGKTGYPIVDAAMRQLNEIGWMHNRCRMIVASFL
TKDLIINWQWGEKYFMQKLFDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAQKYDPEG
EYIRQWLPELSSVDNEYLVTGKISKSERERCDYPQPIVDHKIQQRKFKELYQSQK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgactagtttaattttattttggcatcgtcgcgatctgagaattactgataatatcgga
ttagcagcagcccgtcaacaaagtcccaaagtcgtaggagtattttgtcttgatgaaaat
cttttagcaagagatgacattgcacctgctagagttacttatatgatgggctgtttgcag
cagttgcagcagagttatcaacaagtaggtagtcaattattaattatcaaaggtaaacca
acccaagccattcccaaactagccgaaactctccaagctaaagcagtattttggaattgg
gatgtcgaaccctatgctcaaactagagatcgaaaagtaaaagaagcattaaccgcaaaa
ggtattgaagtttctaatcattgggatcagcttttacacgcgccaggagaaattttaacc
aaatcttcccaacaaccctacaccgtttatactcctttttggaaaaattggattgagcaa
aaaaaacgggcagcgattgtaaaattagaccaatttgaaaatttaaccgcagaagaactt
catcaagctcaacaagcaggagtcattgatttacctaccgccaaagatttaggttacgtt
tgggataacccgttaattctggctcctggaaaaaccgcagctaaagaaagattagcagaa
ttttgttctcgtgcgattaacgaatacgatgaacaaagaaactatcctgccatagacggt
acatctcaactcagtgcagccctaaaatttggtgctattggcattcggacggtttgggaa
gctagtgtagaagcttatgaaaattgtcgcagtgatgaaacaagaaataatattcgctct
tggcaacaggaattagcttggcgagaattttatcaacattgtatgtacttttttccagaa
ttagaacagggtgcctatcgaagagagtttaaaaattttccttgggagaataacgaagat
tattttcaagcttggtgtgaaggtaaaacaggttatcctatcgtcgatgctgccatgcgt
cagttgaatgaaataggttggatgcacaatcgttgtcgtatgattgttgccagtttttta
accaaagatttaattattaactggcaatggggagaaaaatacttcatgcaaaaactcttc
gacggagacttatctgctaataatggtggttggcaatggagtgcttctagtggcatggat
cctaaacctttacgtatttttaatcctgcttctcaagcacagaaatacgatcctgaagga
gaatatattcggcaatggttacctgaattgagttcagtagacaatgagtatttagtaact
ggcaaaatttctaaatctgaaagagaaagatgcgattatcctcaaccaattgttgaccat
aaaatacaacaaagaaaatttaaagagttataccaaagtcaaaaatag
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