Stanieria sp. NIES-3757: STA3757_11410
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Entry
STA3757_11410 CDS
T05130
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stan
Stanieria sp. NIES-3757
Pathway
stan03030
DNA replication
stan03430
Mismatch repair
stan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STA3757_11410
03430 Mismatch repair
STA3757_11410
03440 Homologous recombination
STA3757_11410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stan03032
]
STA3757_11410
03400 DNA repair and recombination proteins [BR:
stan03400
]
STA3757_11410
Enzymes [BR:
stan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STA3757_11410
DNA replication proteins [BR:
stan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STA3757_11410
DNA repair and recombination proteins [BR:
stan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STA3757_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
GeBP-like_C
Motif
Other DBs
NCBI-ProteinID:
BAU63774
UniProt:
A0A140K347
LinkDB
All DBs
Position
complement(1267933..1270608)
Genome browser
AA seq
891 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQIPQMIDRAIELGMPAIALTDHGVMYGAIELIKVCRNKGIK
PIIGNEMYIINATDIEDKSQRYKKYHQVVLAKNTQGYRNLTKLTTLSHLKGFQGKGIFAR
PCINKELLQQYHEGLIVTSACLGGEVPQAILANDLERARNVAKWYKEVFGDDYYLEIQDH
GSQEDRIVNTELVKIARELGIKIVATNDSHFISCYDVEAHDALLCILTGKRITDEKRLRY
SGTEYLKSAEEMKLLFRDHLPEEIIEEAINNTLEVAEKIKPYDILGEPRIPDYPVPSGHT
PDSYLEEITWKGLLERLKCRHLSEVESTYKKRLEEELKVMQEKGFSTYFLVVWDYIKHAR
EKGIPVGPGRGSAAGSLVAYCLKITNIDPVHHGLLFERFLNPERKSMPDVDTDFCIDRRD
EMIQYVTAKYGEANVAQIITFNRLTSKAVLKDVGRVLGVSFADADRLAKLIPVARGKPAK
LKVMISDNSPEPKFKQAYDSESVIVYSDRGEEVDTITVKHWIDMAIRIEGTNKTFGVHAA
GVVISSQRLDEIVPLQRNNDGAVITQYFMEDLESLGLLKMDFLGLKNLTTIKNTADLIKQ
NRGIELDLDQLPLEEIKALKILEKGTSKKLPEDVKNTHKLLEKGDLEGIFQLESEGMRQI
VRDLKPSGIEDISSILALYRPGPLDAGLIPVFINRKHGREPIKYDHKLLEPILKETYAVL
VYQEQIMKMAQDLAGYTLGEADLLRRAMGKKKVSEMQKHKEKFIDGSTKNGVRKETAEDL
FKQMLDFAEYCLSYDTEILTVEYGAMPIGKIVTEQIECTIYTVDRNGFIYTQAIAQWHDR
GEQEIFEYTLDNGSVIRATKDHKFMTIDGQMLPIDEIFERGLELQQINSCN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttggtttacacattcacagcgactacagcctacttgatggtgcatctcaa
attccacaaatgatagatcgagcgatagaattaggaatgcccgcgatcgctttaaccgat
catggtgtgatgtatggtgcgatcgaattaattaaggtttgtcggaataagggtattaag
ccaataattggcaacgaaatgtatattattaatgccactgatattgaagataaaagtcaa
cgctacaaaaaatatcatcaggttgttttagctaagaatactcaaggctatcgaaattta
actaaactaactactctttcccatctgaaagggtttcaagggaaaggaatttttgctcgt
ccttgtattaataaggagttattgcaacagtatcatgaaggattaattgttactagtgct
tgtttaggtggagaagttccgcaagcgattttagctaatgatttagaaagggcaagaaat
gtagcgaaatggtataaagaagtttttggtgatgattattatttagaaattcaagatcat
ggttcccaagaagacagaattgtcaatacagaactcgttaaaattgctcgcgaattagga
attaaaattgtcgctactaacgattctcattttatttcctgttacgatgttgaagcccac
gatgcacttttatgtattttaactggcaaaagaattactgatgaaaaaagattgcgttat
agcggaacagaatatttaaaatctgctgaagaaatgaagttgttattccgcgatcattta
cccgaagaaattatcgaagaagcgattaataatactttagaagttgcggaaaaaattaaa
ccttatgatattttaggtgaacctaggattccagattatcccgtaccttctggacataca
cctgatagttatttagaagaaattacttggaaaggattattagaaagactcaagtgccgt
catctttctgaagtagaatcaacctacaaaaaaaggttagaagaagaactaaaagtaatg
caggaaaaaggattttctacttactttttagtggtttgggattatatcaaacacgcacga
gaaaaaggtattcctgtagggccaggaaggggtagtgcagcgggttctttagttgcttat
tgtctcaaaataacaaatatcgatcccgttcatcatggtttattatttgaacgttttctt
aatcccgaacgaaaatcaatgcctgatgttgataccgatttttgtattgatcgcagggat
gaaatgattcaatatgttactgctaaatatggggaagcgaatgttgcccaaattattact
tttaaccgtttgacatctaaagctgttttaaaagatgtgggtagagtgttaggagtaagc
tttgctgatgcggatcgtctggcaaaattaattcctgttgccagaggaaaacctgctaag
ttgaaagtgatgatttctgataatagtcccgaacctaagtttaaacaagcctatgacagt
gaaagtgtgattgtttatagcgatcgcggggaagaagtagatacaattacagttaagcat
tggatagatatggcaattcgcatcgaaggtactaataaaactttcggtgttcatgcagca
ggggtagttatttcttctcaacgtttagatgagattgtccctttacaacgcaacaatgat
ggtgcagtaattactcaatattttatggaagatttagaatctctgggtctattaaaaatg
gactttttaggtttaaaaaatcttactacaattaaaaatactgctgatttgatcaagcaa
aatcgaggtattgaattagatttagaccaattacctttagaagaaattaaagccttaaaa
attctggaaaaaggcacgagtaaaaaattgccagaagatgttaaaaatactcacaagctt
ttagaaaaaggggatttggaaggaatttttcagttagaatctgaaggaatgcgccagatt
gttagggatttaaaaccttcaggaattgaagatatttcttctattttagctctttatcgt
cctggtcctttagatgcaggattaattccagtttttatcaatcgcaaacacggtcgcgaa
ccgattaaatacgatcataaattgttagaaccaattttaaaagaaacttatgctgtccta
gtttaccaagagcaaattatgaagatggcacaagatttagctggttatactcttggggaa
gcagacctattgcgtcgtgcgatgggtaaaaagaaagtttcagaaatgcagaagcataaa
gaaaaattcatcgatggttcaactaaaaatggagtacgcaaagaaactgctgaagattta
ttcaaacaaatgctcgattttgctgaatattgtcttagttatgacacagaaatattaaca
gtagaatatggggcaatgccgattggtaaaattgttacagaacaaattgaatgtactatt
tatactgttgatcgcaatggttttatttatactcaagcgatcgcgcaatggcatgaccgt
ggcgaacaagaaatttttgaatatactctagataatggttcagtgattcgggcaactaaa
gaccataaatttatgacaattgacggtcaaatgttacctattgatgaaatctttgaacga
ggattagaacttcaacaaattaatagttgtaattaa
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