Stanieria sp. NIES-3757: STA3757_21930
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Entry
STA3757_21930 CDS
T05130
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stan
Stanieria sp. NIES-3757
Pathway
stan03030
DNA replication
stan03430
Mismatch repair
stan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STA3757_21930
03430 Mismatch repair
STA3757_21930
03440 Homologous recombination
STA3757_21930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stan03032
]
STA3757_21930
03400 DNA repair and recombination proteins [BR:
stan03400
]
STA3757_21930
Enzymes [BR:
stan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STA3757_21930
DNA replication proteins [BR:
stan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STA3757_21930
DNA repair and recombination proteins [BR:
stan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STA3757_21930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
T2SSK
HROB
SecM
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
BAU64817
LinkDB
All DBs
Position
2380117..2381469
Genome browser
AA seq
450 aa
AA seq
DB search
MVKIVSRKSLGKQPVYDIGVIQDHNFLLSNGLVAANCFNKSHSTAYAYVTYQTAYLKANY
PVEYMTALLTASSGDRDKVEKYRENCQRMGIEVEPPDINRSEEDFTPQKNKILFGLSAVK
NLGQGAIENILQARAEAGGKFNSLADFCERVDLRVVNRRALETLIYCGAFDKIDPNRKHL
INDLEVVIPWAQSRAKEKEIGQMNLFDLMSNISKTDNNNNGSTFEQAPRTPKVEDFPLQE
KLKLEKEHLGFYVSDHPLKAIQKSTQILSPINLNQLSEQKSRQKICAVVMLNAVKTIITQ
KGTPMAFVQMEDVTGEAEGTVFSDTYEKIESLLKENYHLIVWGKAQARNDKHQLIIEDAE
LVEKIKIITLEITPQQALDQSVINRLKGILQEHSGETHKFKIPVIVIINHNNQRQFIRLG
QKFWVQEEYGAMISLKNAGFSVSNQPLVSS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaattgtcagtcgcaaatctttaggcaaacaacctgtctatgacattggtgta
attcaagaccacaactttttgttaagcaatggattggttgctgccaactgtttcaacaaa
tctcactccactgcttacgcctacgttacttatcaaacagcttatctaaaagccaattat
cccgtagaatatatgaccgcactactaactgctagtagtggcgatcgcgacaaagtagaa
aaatatcgagaaaattgtcaaagaatggggatcgaagtcgaaccccccgatattaatcgt
tctgaagaagactttactcctcaaaaaaacaaaattttatttggattatctgcggttaaa
aatttaggacaaggagcaattgaaaatattcttcaggctagagccgaagcaggaggaaaa
tttaattctttagcagatttttgcgaaagagttgatctaagagtggttaatcgtcgcgct
ttagaaactttaatttattgtggggcttttgacaaaatagatccaaatcgtaaacactta
attaatgatttagaagtcgttattccttgggcgcaaagtagagctaaagaaaaagaaatc
ggtcaaatgaatttatttgacttgatgagtaatatttctaaaactgataataataataac
ggttctacttttgaacaagcacctcgtacaccaaaggtagaagattttcccttacaagaa
aaactcaaacttgaaaaagaacacttaggtttttacgtttccgatcatcctcttaaagca
atccaaaaatcaactcaaattttatctccaatcaatctcaatcaattatcagaacaaaaa
tctcgacagaagatttgtgcagtagtaatgctcaatgcagtcaaaacaattattactcaa
aaaggtactccgatggcttttgtgcaaatggaggatgttactggagaagctgagggtacg
gttttttctgatacgtacgagaaaatcgaatcattactcaaggaaaattaccatctaatt
gtgtggggaaaagcacaggcacgcaatgataagcatcaattaattattgaagatgctgaa
ttagtagaaaaaatcaaaataattactttagaaattactcctcagcaagcactagatcaa
tctgttattaatcgattaaaaggaattcttcaggagcattcaggagaaactcataaattc
aaaattccagttatagtaataattaatcataacaatcaacgtcagtttattcgcctcgga
caaaaattttgggttcaagaagaatatggagctatgatttctttaaaaaatgcgggtttt
tctgtttccaatcaacctttagtttctagttaa
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