Stanieria sp. NIES-3757: STA3757_23590
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Entry
STA3757_23590 CDS
T05130
Symbol
sigF
Name
(GenBank) group 3 sigma-70 RNA polymerase sigma factor F
KO
K03090
RNA polymerase sigma-B factor
Organism
stan
Stanieria sp. NIES-3757
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stan03021
]
STA3757_23590 (sigF)
Transcription machinery [BR:
stan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STA3757_23590 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_Crp_2
HTH_17
SpoIIID
HTH_8
Xre-like-HTH
HTH_3
HTH_23
HTH_24
LacI
Crp
DUF134
KORA
HTH_Tnp_4
HTH_Tnp_ISL3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BAU64981
UniProt:
A0A140K6K4
LinkDB
All DBs
Position
complement(2570696..2571475)
Genome browser
AA seq
259 aa
AA seq
DB search
MSVCINNNIKIDSLLLLQEYQINKSTKLRNQIMELNIGLVKKEVNHWLNQCNETYEDLLQ
VGCIGLIRAIERFDLEKGNAFSSFAIPYIRGEIQHYLRDKSSTLRIPRRWVELRQQSINF
IQSFRTQFNRQPLDSEIAQFLEISLKEWQDIKLAHQNRNPLSLDVSVNHDNDSQTLLSDL
VPDPKYRSFQLAHEDRFRLQQALSQLEDRTRNVVEFVFLHDLTQKETAQLLGISVVTVSR
QMKKGLKILKKSMKQENCA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtttgtattaataataatattaaaattgatagcttacttttattacaggaatat
caaattaataaaagcactaaattacgtaaccaaatcatggaattaaatattggtttggtc
aaaaaagaggtaaatcattggctcaatcaatgcaatgaaacctatgaggacttattacaa
gtcggttgtattggtttaattagagcaattgaacgtttcgatcttgaaaaaggtaatgct
tttagttcctttgctattccttatattagaggtgaaattcaacactatctccgagataaa
agttctactcttcgcattcctagacgttgggtagaattaagacaacaatcaattaatttt
attcaaagttttcgtactcaatttaatcgtcaacctttagattcagaaatcgctcagttt
ttagaaatttctttaaaagagtggcaagatattaaattagctcatcaaaatagaaatcca
ttaagtttagacgtttctgttaatcatgataatgacagtcaaacgcttttatcagatcta
gttcccgatcctaaataccgtagttttcaattagcccatgaggatcgttttcgtttacaa
caagctttatctcaattggaagaccgcactagaaatgtagtagaatttgtttttttacac
gatttaactcaaaaagagactgctcaattattaggtattagtgtcgttactgtttctcgt
cagatgaaaaaaggtttgaaaatcctcaaaaaatcaatgaagcaagaaaattgtgcctaa
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