Stanieria sp. NIES-3757: STA3757_34730
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Entry
STA3757_34730 CDS
T05130
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stan
Stanieria sp. NIES-3757
Pathway
stan03420
Nucleotide excision repair
stan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STA3757_34730
03430 Mismatch repair
STA3757_34730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stan03400
]
STA3757_34730
Enzymes [BR:
stan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STA3757_34730
DNA repair and recombination proteins [BR:
stan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STA3757_34730
MMR (mismatch excision repair)
Other MMR factors
STA3757_34730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
Viral_helicase1
DUF1978
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAU66072
LinkDB
All DBs
Position
3816859..3819174
Genome browser
AA seq
771 aa
AA seq
DB search
MTVNTDFFSHLNPSQRRAVEHFCGPMLVVAGAGSGKTRALTYRIANLIRNHKVEPEHILA
VTFTNKAAREMKERIEYLFVQELAQDKYGQRLEFLNEYDQKKLKSQVYKKITKPLWIGTF
HSLFARLLRFDINKYQDERGRTWKRNFSIFDESDVQSLIKNIVTKQLNLDDKKFNHRTVR
YAISNAKNQGLTPETYARENGGYKGRVIAEVYNEYQAQLAANNALDFDDLILVPVRLFQQ
NESILGYWHTQFHHILVDEYQDTNRTQYDLIRLLATNGETKKQEWDWRGRSLFVVGDADQ
SIYSFRLADFTILLDFQQDFGDGLPDDDTRTMIKLEENYRSRENILQAANALIENNSQRI
DKVLKATRGIGEQIYIYKADDEQHEAKFVINQLKRMVTENPELTWGSFSILYRTNAQSRP
FEDLLLQNSIPYNIVGGLKFYDRKEVKDAIAYLRMIVNPNDTVSLLRIINTPRRGIGKTS
IESLNNAAQQLGVPLWEILSDETSVNTMAGRSAKSVNKFAQMILHLQQQQENLTAAETLN
YVMEASGYVDDLKKQGTDEADNRIANVVELYNAIVQFQEDNEENKLQDFLANASLASDLD
NLEEGQEKVSLMTLHSAKGLEFPVVFLVGMEQGLFPHNRTLNDPLELEEERRLCYVGITR
AQEQLFLTHARERRLWGERELAVASQFLKELPQDLVSSNIKSHYRAKTANTTIQTNNYTW
NIGDRVWHREFGEGEITHILGSGKKATLAIKFPSLGTTKIIPQLTPMEKIN
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaatacggacttttttagccatctcaatccttctcaacgtcgcgctgttgaa
catttttgtggccctatgttagtggttgctggtgctggatctggtaaaactagggcatta
acttatcgaattgctaacctgattcgcaaccataaagttgaaccagaacatattttagcg
gtgacttttactaataaagctgcgcgagaaatgaaggaaagaattgaatatctgtttgtg
caagaattggcacaggataaatatggacaaaggttagagtttttaaacgaatacgaccaa
aaaaaactgaagtcgcaagtttataaaaagattactaaacctctttggattggaactttt
catagtttatttgctcgtttacttcgtttcgatattaataaatatcaggatgaaagaggt
cgtacttggaagcgaaacttttctatttttgacgagtcagatgttcaaagtttaattaaa
aatattgttactaagcagttaaatctagacgataaaaagtttaatcatcgtacagtaaga
tatgcgattagtaatgctaaaaaccaagggttaacacctgaaacttatgctagggaaaat
ggcggttataaaggtagagtaattgctgaagtttataacgaatatcaagcacaactagca
gctaataatgctttagattttgatgatttaattttagttccagttagattgtttcaacaa
aatgaatccattttgggttattggcacactcagtttcatcatattttggtagatgaatat
caggatactaaccgcactcaatacgatctaattcgtttacttgctactaatggcgaaaca
aaaaaacaggaatgggattggcgaggtagatcattatttgtggtgggagatgcggatcaa
tctatttattcttttcggttagcagactttacaatcttgctcgattttcaacaagatttt
ggggatggtttacccgatgatgatactcgtacaatgattaaattggaagaaaattatcgt
tctcgggaaaatattttacaagctgctaatgctttaattgaaaacaatagccaacggatt
gataaagttttaaaagcaactagaggaatcggagaacaaatttatatttataaagcggat
gatgaacaacacgaagctaagtttgttattaatcaacttaaacgaatggtaacagaaaac
cctgaattaacttggggtagtttttcaattttatatcgaactaatgctcagtctcgtccc
tttgaggatttattattacaaaatagtattccttacaatattgtcggtggtttgaaattc
tacgatcgcaaagaagttaaagatgcgatcgcgtatcttcggatgattgttaatcctaat
gatacggttagtttactgagaattattaatactcccagacgtggaattggtaaaactagt
attgaatctcttaataatgcagcacaacaattaggtgttcctctttgggaaattcttagt
gatgaaacttcggttaatacaatggcaggcagatcggcaaaatcagttaataaatttgcc
caaatgattttacatctacaacaacaacaagaaaacttaactgctgctgaaactttgaac
tatgttatggaagcatctggttatgttgatgatttaaaaaaacaaggtacagatgaagcg
gataatcgcattgctaacgttgttgaattatataatgcgatcgttcaatttcaagaagat
aatgaagaaaataaactgcaagatttccttgctaatgcttcccttgcttccgatctagat
aatcttgaagaagggcaagaaaaagtctcattaatgacacttcattctgccaaaggtttg
gaatttcctgtcgtttttctagtcggaatggaacaaggtttattccctcacaatcgtact
ttaaacgatcctttagaattagaagaagaacgtcgtctttgttatgtaggcatcactcgc
gcccaagaacaactatttttaactcatgctagagaacgtcgtctttggggggaaagagaa
cttgctgttgcctcacaatttttaaaagaacttcctcaagatttagttagtagtaatatt
aaatctcattaccgtgctaaaactgcaaatactacaattcaaactaataattatacttgg
aatataggcgatcgcgtttggcatcgagagtttggtgaaggagaaattacccacatttta
ggttcaggaaaaaaagccactctagcaattaaatttcctagtttaggtacaacaaaaatt
atccctcaactaactccaatggaaaaaataaattaa
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