Stanieria sp. NIES-3757: STA3757_34890
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Entry
STA3757_34890 CDS
T05130
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
stan
Stanieria sp. NIES-3757
Pathway
stan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STA3757_34890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stan03400
]
STA3757_34890
Enzymes [BR:
stan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
STA3757_34890
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
STA3757_34890
DNA repair and recombination proteins [BR:
stan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STA3757_34890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
BAU66087
UniProt:
A0A140K9R0
LinkDB
All DBs
Position
complement(3833332..3834207)
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AA seq
291 aa
AA seq
DB search
MPELPEVETVRQGLNQLTLEQTIEGGKVLLSRTLAYPLSGTEFLQGIVHKKIVSWERRGK
YLLAQLQSASAQPAGWLGVHLRMTGQLLWVKQSEPLQKHTRIRLFFPNHQELRFVDTRTF
GKLWYVPPALQPAEIITGLQKLGPEPFAEDFSLAYFSQKLRHSRRNIKTLLLDQELVAGI
GNIYADEALFKSGIRPTAIATNLTDTQIKNLYVAIIEVLQAAIAKGGTTFSDFLNLLGVS
GNYGDAAWVYGRGGYPCRICGNKIEKIKLNGRSAHFCPDCQISSDNAVIEV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaactaccagaagtagaaacagtacgtcagggtcttaatcagttaaccctcgaa
caaacaattgagggtgggaaggtgttattgtctagaacgcttgcctaccctctttctgga
acagaatttttacaaggaatagttcataaaaaaattgtcagttgggaaaggcgaggtaaa
tatttactagcgcaactacaatctgcttctgcacaaccagcaggttggctaggagttcat
ctgcgtatgactggtcaattgttgtgggtaaaacaatcagaacctttacagaaacatact
cgcattcggctgttttttcccaaccatcaagaattacgttttgtcgatacgcgcactttt
ggaaaactttggtatgtgccacctgctttgcaaccagcagaaattattacaggcttacaa
aaattaggaccagaaccttttgcagaagatttttctttggcttattttagtcagaaatta
cgccatagtcgtcgtaatattaagactttgctgttagaccaggaattagtagcaggaatt
ggtaatatttatgcagatgaggctttgtttaaaagtgggattagaccaactgcgatcgca
acaaatttaaccgatacacagattaaaaatctttatgttgctattatcgaagttttacaa
gcagcaatagctaaaggcggaactacttttagtgattttctcaatttgttaggagtcagt
ggtaattatggcgatgctgcctgggtttatggaagaggtggttatccctgccgtatttgt
ggaaataaaattgaaaaaattaaattaaatggtcgttctgctcacttttgtcctgattgt
caaattagttccgacaatgcagtgattgaggtttaa
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