Stanieria sp. NIES-3757: STA3757_36380
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Entry
STA3757_36380 CDS
T05130
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
stan
Stanieria sp. NIES-3757
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stan03021
]
STA3757_36380
Transcription machinery [BR:
stan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STA3757_36380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
HTH_23
HTH_10
Xre-like-HTH
AbiEi_4
HTH_17
HTH_Crp_2
Sigma70_ECF
HTH_8
Tsc35
ApoC-I
Motif
Other DBs
NCBI-ProteinID:
BAU66235
UniProt:
A0A140KA58
LinkDB
All DBs
Position
complement(3982391..3983158)
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AA seq
255 aa
AA seq
DB search
MSTQSFSFRCIELLQAYASNPSLKLRNQLVELNAGLVRKVAHQVSRKCAEPYEDLEQIGY
LGLIRAIERFDTHQGSAFSSFAIPYIRGEMLHYLRDKGSMMRIPRRWQELYNQGRKLRKQ
LIEALERLPYDTEIAKALGVSVQEWSECQLALQNRLPISLDALVNQSQDSSITFGETIAD
PNYQEIRQLEEDKMQLQRAMSQLEDKTKAAIECVYLWDLPRKEAAQYIGISPMTVTRHLH
KGIEQLGAIMQPQAA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcaatcttttagttttcgttgtatagaattactacaagcctatgcttctaat
ccttctttaaaattacgtaatcaactagtagaacttaatgcaggtttagtcagaaaagta
gctcatcaagttagtagaaaatgtgctgaaccttatgaagatttagaacaaattggttat
cttggtttaattagagcaattgagcgttttgatactcatcaaggttctgcttttagctct
tttgcgattccttatattcgtggtgaaatgttacattatctgagagataaaggtagcatg
atgaggattcctcgtagatggcaagagctttataatcaaggcagaaaattacgcaaacaa
ttaattgaagctttagaaagattaccttacgatacagaaattgctaaagctttaggagta
tctgtacaagaatggagtgaatgccaattagctctacaaaatcgtttaccaattagcttg
gatgccttagttaatcaatctcaagattcttcaattacttttggtgaaacaattgcagat
cctaattatcaagaaatacgtcaattagaagaggacaaaatgcaattacaaagagcaatg
agccagttagaagacaaaactaaagcagccattgaatgtgtatatttgtgggatttacct
cgcaaagaagctgctcagtatattggcattagtcctatgacagtgactagacatttgcat
aaaggaatagagcagttaggagcaattatgcaaccccaagctgcctaa
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