Stanieria sp. NIES-3757: STA3757_36450
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Entry
STA3757_36450 CDS
T05130
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
stan
Stanieria sp. NIES-3757
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stan03016
]
STA3757_36450
Enzymes [BR:
stan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
STA3757_36450
Transfer RNA biogenesis [BR:
stan03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
STA3757_36450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
DUF6572
Motif
Other DBs
NCBI-ProteinID:
BAU66242
UniProt:
A0A140KA65
LinkDB
All DBs
Position
complement(3989568..3991583)
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AA seq
671 aa
AA seq
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MEKGTLIEFRTQGERRLAVAERPEGKKDWIVIDESGQSHKIRPQRVEYTVNGGLYKPSDI
SNFIKEAQSYLDPSSLEVAWEILVEDGDLVTPQQMAELLFSDQSPALCYSAHLLLSQDKI
YFKNKGDAYEPRSAAQVEEIKHQLEVEQQKNREKEEFINHLQQALAGKPVEWTESDRSKL
ETLEKFVIQPEYNSRVAQEILSLTKRGTDSQAAFELLVDLGLWSKHENLFLRRSSYPTYF
SKKVLDVAQFYLQSPPFDSDLNRLDLTHLKVYTIDDESTEEIDDGLSIEYGDDGKPAKLW
IHIADPTRIVAPGDELDLEARRRSTSLYLPTGMISMFPSELATGPMSLIQGQTCPALSFG
VVLEETGAVKEYSIYPTLIRPTYRLTYDDVDEMLDLGVTKEPEIAELAKWASLRRKWRQK
QGSIQILMPESLIKVKENEEIIIELLDESKSRQLVAEMMILAGEVAGKYGQEHNLPLPFR
GQPQPELPPEEELLQLPPGPVRFCALRRCMPRSEITTTPSRHASLGLNSYIQVTSPIRRY
TDLLAHFQIKAHLRNQSLPFSVEELQEIIYSVANSAYEATLVERQTNRYWGLEYLRRNCD
RVWGVLVLRWLREEDRLGIILLEDLGLELPHRFERAVTLGDRLEVQVTRADPHRDEIRFR
EITPSEIQATV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagggaacactgattgaattcagaacacaaggagagcgtcgtcttgcagttgcc
gaacgaccagaaggaaaaaaagattggattgttattgatgaaagtggacagtcacacaaa
atacgtcctcagcgcgtagaatataccgtcaacggtggtttgtacaagccctctgacatt
tccaattttattaaagaagctcaatcttacctcgatcccagtagtttagaagtagcttgg
gaaatattggtagaagatggtgatttagtgacaccccaacaaatggctgaattgctattt
tctgaccaatcgccagctttgtgttattctgctcatcttctcttaagtcaagataaaatc
tattttaaaaataaaggtgatgcttatgaaccgcgttcagcagcacaagtagaagaaatt
aaacatcaactagaagtagaacaacaaaagaatcgcgaaaaagaagaatttattaatcat
cttcaacaagctttagcaggaaaaccagtagaatggacagaaagcgatcgcagcaagctg
gaaaccctagaaaaatttgttattcaaccagaatataattctcgtgtagctcaagaaatt
ctgagtttaaccaaaagaggaacggattcccaagcagcatttgagttattagtagattta
ggattgtggagcaaacatgaaaacttatttctacgacgtagttcttatcctacgtatttt
tccaaaaaggtacttgatgtggcgcaattttatcttcaatctccgccgtttgactctgat
ttgaaccgtcttgatttaactcatctaaaagtttacacgattgatgacgagagtacagag
gaaatagatgatggtttaagcattgaatatggtgatgatggcaaaccagctaaactttgg
attcatattgctgatcctactcgaatagtcgctcctggagacgaactagatttagaagca
cgccgtcgaagcactagcttatatttgccgacaggaatgatttcgatgtttccttcggaa
cttgccactggaccgatgagtttaattcaaggtcaaacttgtccagcgttgagttttggt
gttgtgcttgaagaaacaggagcggtcaaagagtacagtatttacccaactttgattcga
cctacttatcgcctgacttacgatgatgtcgatgaaatgcttgatttgggtgtaactaaa
gaaccagaaattgctgaattagctaaatgggcaagtttaagaaggaaatggaggcaaaaa
caaggatcgattcaaatcctgatgcccgaatctttgattaaagtcaaagaaaacgaagaa
attattattgagttgttagatgagtccaaatcccgtcagttagtcgcagaaatgatgatt
ttagctggagaagtagcaggcaaatacgggcaagaacataatttacctctaccttttcgc
ggacaaccacaaccagaattaccgccagaagaagaactgctacaattaccgccagggccg
gtccgtttttgtgctttacgtcgctgtatgcctcgtagtgaaatcactactactccttct
cggcacgcaagtcttggtttaaatagctatattcaagttacttctccgattagaagatat
acagatttgctagctcattttcagattaaagctcatttacgcaatcaaagcttacccttt
tctgtagaagagttgcaggaaattatctacagcgttgctaattcagcctatgaagctact
ttagtagaacgtcaaactaatcgttattggggattagagtatttaagacgtaattgcgat
cgcgtttggggagtgttagtattgcgttggttaagagaagaagaccgtttagggattatt
ttactagaagatttaggactagaattacctcatcgttttgaaagagcggtaactttaggc
gatcgcttagaagttcaggttactcgtgcagatccccatcgagatgaaattcgctttcga
gaaattactccttcagaaattcaggcaaccgtttag
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