Stanieria sp. NIES-3757: STA3757_39290
Help
Entry
STA3757_39290 CDS
T05130
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stan
Stanieria sp. NIES-3757
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stan03016
]
STA3757_39290 (truB)
Enzymes [BR:
stan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
STA3757_39290 (truB)
Transfer RNA biogenesis [BR:
stan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STA3757_39290 (truB)
Prokaryotic type
STA3757_39290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAU66524
LinkDB
All DBs
Position
4294264..4295193
Genome browser
AA seq
309 aa
AA seq
DB search
MTNTGFINLNKPAGFTSHDCVAKMRRLLKTKKIGHGGTLDPAATGVLPIAVGKATRLLQF
LPEAKAYRARIRFGVTTTTDDLEGEIVSSQAVEDLKLENIIPYLNKLTGTIEQVPPIYSA
IKKEGKKLYELARQGKQVDIPSRIVTIDELQIIEFSSQDFPELEIEIKCSPGTYIRAIAR
DLGLMLGVGGSLANLIRIESCGMKLTNSQTFTDIEQQLAAENFNLIPPSQALKHLDTVSL
NDQDALRWCQGQVITIESEQLQSKQCLSESEIYLKIFDNNQTFLGIAQLINQTERLLVKP
KIVCANLEQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgactaatactggttttatcaatttaaataaacctgctgggtttacttcccatgattgc
gttgctaagatgcgacggctattaaaaaccaaaaaaatcggacatggaggaactctcgat
cctgctgctacaggtgttttaccgattgcagttgggaaagcaaccagactattgcaattt
ttaccagaagctaaagcttatcgcgctcgaattcgtttcggagtaactaccactaccgat
gatttagaaggagagattgttagttctcaagctgttgaagatttaaaactagaaaatatt
attccttatttaaataaactaaccggaacaatcgaacaagttcctccaatttatagtgct
ataaaaaaagaaggaaaaaaactttatgaattggcacgacaaggaaaacaagttgatatt
ccctcgcgaatagttactattgatgaactacaaataattgaatttagttctcaagatttt
cctgaattagaaatagaaattaagtgtagtcctggaacatatataagagcgatcgcacgt
gatttaggtttaatgctgggtgttggtggaagtttagctaatttaatccgaatcgaaagt
tgtggtatgaagttgactaacagtcaaacttttactgatatagaacaacaattagcagca
gaaaattttaatttaattccacctagtcaagctttaaaacatttagatacagttagttta
aatgaccaagatgctctacgttggtgtcaaggacaagtaattacaattgagtcggaacaa
ttgcagtcaaaacaatgtttgtctgagtcagaaatttatctcaaaatttttgataataac
caaacttttttaggaattgctcaactaattaatcaaacagaaagattattagttaaaccg
aaaatagtatgtgctaacttggagcaatag
DBGET
integrated database retrieval system
