Stanieria sp. NIES-3757: STA3757_40170
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Entry
STA3757_40170 CDS
T05130
Name
(GenBank) DNA-directed RNA polymerase, gamma subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
stan
Stanieria sp. NIES-3757
Pathway
stan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STA3757_40170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stan03021
]
STA3757_40170
03400 DNA repair and recombination proteins [BR:
stan03400
]
STA3757_40170
Enzymes [BR:
stan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STA3757_40170
Transcription machinery [BR:
stan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STA3757_40170
DNA repair and recombination proteins [BR:
stan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STA3757_40170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
BAU66612
UniProt:
A0A140KB85
LinkDB
All DBs
Position
complement(4411302..4413185)
Genome browser
AA seq
627 aa
AA seq
DB search
MRNQLEQRFDYVKIGIASPERIRQWGERTLPNGQLVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVTHVWYLKG
IPSYLSILLDMPLRDVEQIVYFNAYVVLDPGNAQNLSPKQLLTEDQWIEIEEQLYSEDSE
LVGIEVGIGAEAVQRLLEEVELESEAEKLRQEIEEAKGQKRAKLIKRLRVIDNFIATGAR
PEWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIYQCGLPREMAIELFQPFVIHRLIHSGMVNNIKAAKKLIQRGDPGVYEVLK
EVITGHPVLLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LEAQAEARLLMLACHNILSPATGRPIVAPSQDMVLGCYYLTAENPNATKGKDRRFASLDD
AIKAYEQGQVDLHAYVWVRYEGEVETSKPDDTVIEMETLADGSTIKYYQQRLVRETAEGE
YLAQYVHTTIGRIIYNKVIQETLQTVS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatcaactagaacaaagatttgattacgttaaaattggcattgcttctccagaa
agaattcgtcaatggggagaaagaactttaccaaacggtcaactagttggagaagttact
aagccagaaactattaattaccgaactctgaaaccagagatggacggactgttctgtgag
cgaatttttggtccagctaaggattgggaatgtcattgcggaaaatataaacgggtgcgc
catcgtggaatagtctgtgagcgatgtggtgtagaagtaactgagtcgagagtgcgtcgc
catcgcatgggctatattaaattagctgctcccgttactcatgtttggtatctcaaaggg
atacctagttatctaagcattcttttagatatgcctctacgagatgtagagcaaatcgtt
tactttaatgcttatgtcgttctcgatccaggtaatgctcagaatttatcacccaaacag
ttattgactgaagaccaatggattgaaattgaagaacaactctacagcgaagattctgaa
ttagttgggatagaagttggaattggtgctgaagcagttcaaagacttttggaagaagtt
gaactagagtcagaagcagaaaaacttcgacaagaaattgaagaagctaaaggtcaaaaa
cgagccaaattaattaaaagactcagagtaattgataattttattgctactggagctcgt
cctgaatggatggttttatcggtaattccggtaattcctcccgatttacgtccaatggtt
caattagatggaggtcgttttgctacgtccgatttaaacgatctttatcgacgagtaatt
aatcgaaataatcgtttagctcgtttgcaagagattttagcaccagaaatcatcgtacgt
aatgaaaagcggatgctccaggaagcagttgatgctttgattgataatggtcgtcgcggt
agaaccgttgttggagcaaataatcgtcccctaaaatctctttcagatattatcgaaggt
aaacaaggtcgtttccgacaaaatttattaggaaaacgggtagattactctggacgttcg
gtaattgtcgttggccccaaattaaagatctatcagtgcggtttgcccagagaaatggcg
atcgaattgtttcagccttttgtaattcaccgtttgattcatagcggtatggtgaacaat
attaaagctgctaagaaacttattcaaagaggcgatcctggtgtttacgaggtactgaaa
gaagttattaccgggcatcctgttctattaaaccgcgctcctactttacaccgtttgggg
attcaagcttttgagccaattttagtggaaggaagagcaattcagttacatcccctggtt
tgtcctgcttttaacgccgactttgacggtgaccaaatggcagtacacgtacctctttct
ttagaagctcaggcagaagcaagattgctaatgttagcttgtcataatattctgtctcct
gccacaggcagacccattgttgcgccttctcaagatatggtactaggctgttattactta
accgcagaaaatcctaatgctactaaaggaaaagaccgtagatttgctagcttagatgat
gcgattaaagcttacgaacaaggacaagtagatcttcacgcttatgtttgggttcgttat
gaaggagaggtggaaaccagtaaaccagatgatactgtaatcgaaatggaaactttggct
gatggtagcacgatcaaatattatcaacaacgactagttagagaaactgcggaaggagaa
tacttggctcaatacgtccatacaactattggcaggattatttataacaaagtcattcaa
gagactcttcaaacagtgtcttaa
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