Stanieria sp. NIES-3757: STA3757_44680
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Entry
STA3757_44680 CDS
T05130
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stan
Stanieria sp. NIES-3757
Pathway
stan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STA3757_44680 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stan03021
]
STA3757_44680 (rpoA)
03400 DNA repair and recombination proteins [BR:
stan03400
]
STA3757_44680 (rpoA)
Enzymes [BR:
stan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STA3757_44680 (rpoA)
Transcription machinery [BR:
stan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STA3757_44680 (rpoA)
DNA repair and recombination proteins [BR:
stan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STA3757_44680 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PHD_like
Motif
Other DBs
NCBI-ProteinID:
BAU67060
UniProt:
A0A140KCI3
LinkDB
All DBs
Position
complement(4954344..4955333)
Genome browser
AA seq
329 aa
AA seq
DB search
MAQFQIECVESKTLKNQNQYSKFVLEPLERGQGTTLGNALRRVLLSNLEGAAVTAIRIGG
GMAKDENRQEHKFGFATHEFATIEGVREDVLEIILNMKEIVLKSYTSQPQIGRLVATGPG
TVTTGQFDVPSEVEIVDPNQYVATLAEGATLEMEFRIEKGKGYRAVERGREEGSSLDFLQ
IDAVFMPVTKVNYSVEDARVDGSGIRERLLLEIWTNGSIKPEEALSQAAAIVVELFNPLK
DLTLEAIEPDYIEDEDPTSQIPIEELQLSVRAYNCLKRAQINSVADLLDYTQEDLLEIKN
FGQKSADEVIEALRKRLGITLPQEKSAKT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaatttcaaattgaatgtgttgagtctaagactctaaaaaatcaaaatcagtat
agcaaatttgttctcgaacctctcgaacgtggtcaaggaactacattaggcaatgctcta
agaagagttttattgtcaaacttagagggggctgctgtcacagcaattcgtattggtggg
ggaatggcaaaagatgaaaacagacaagaacataagtttggttttgctacccacgaattt
gccacgattgaaggagtaagagaggacgttttagagattattctaaacatgaaggagatt
gtcctcaaaagctacactagtcagccccaaattggtcgtttggtcgcgactggacctgga
acagtaacgactggtcagttcgatgtgccttcggaagtagaaatagtcgaccccaatcaa
tatgttgctactttagctgaaggagcaactttagagatggaatttcggattgaaaaaggt
aaagggtatcgagctgttgaaagaggtagagaagaaggaagctctttagattttctgcaa
attgatgctgtgtttatgcctgttactaaagtaaattacagcgttgaggatgctcgggta
gatggttcaggtatcagagaaagactgcttttagaaatttggactaatggtagcattaaa
cccgaagaagctttatctcaagcagcagcaattgtagttgagctgttcaatcctttgaaa
gacttaactttagaagcgattgaaccagattacattgaagacgaagatccaaccagtcaa
attcctattgaagaactacaactctccgttagagcttataactgtctgaagcgggcgcaa
attaattctgtggcggatttattggattatacccaagaagacctgttagaaattaagaac
tttggtcagaaatcggcggatgaagttattgaagctttacgtaaacgactgggaattact
ttacctcaagagaaatcagctaaaacataa
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