Staphylococcus sp. AntiMn-1: AOB58_1168
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Entry
AOB58_1168 CDS
T09786
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
stap
Staphylococcus sp. AntiMn-1
Pathway
stap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOB58_1168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stap03400
]
AOB58_1168
DNA repair and recombination proteins [BR:
stap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOB58_1168
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOB58_1168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_33
AAA_23
nSTAND1
AAA_21
nSTAND3
AAA_22
APS_kinase
AAA_18
DnaJ_CXXCXGXG
AAA_14
ATPase_2
Viral_helicase1
ATPase
cobW
NACHT
SLFN-g3_helicase
RNA12
HlyD_D4
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ANK37970
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Position
complement(1174023..1176857)
Genome browser
AA seq
944 aa
AA seq
DB search
MKQPSIVVKGARAHNLKGVDIEIPKDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARIGKP
FCPNHGIEIESQTVQQMVDQVMQLEERSKIQLLAPVVSHRKGAQEKLIDDISKKGYVRVR
VDGEIMDVNEVPNLDKNKNHTIEVVIDRLVVKAGIEGRLADSIETAIRLAEGTLIVDIIG
VEELKFSENHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGLKLKVDLDLVVPDTNKT
LNEGAIIAWESSSSDFYPTLLNRVCEVYKINMDKPFKKLTDRQQDIILNGSKGKEIEFTF
KQRNGQTRKRTMEFEGVINNINRRYHDSPSELVREMMSKYMTELPCETCNGKRLSREALS
VYVSGQNIGEVVEHSIKDALHMYEHIELSDQDRKIADQILKEINSRLEFLYNVGLEYLTL
NRASGSLSGGEAQRIRLATQIGSRLSGVLYVLDEPSIGLHQRDNDRLISTLKEMRDLGNT
LIVVEHDEDTMRAADYLVDVGPGAGEHGGEIVASGTPKQVMNQKKSLTGQYLSGKKLIEV
PEERREITDRKVSVKGARSNNLKDIDVDFPLSTMTVVTGVSGSGKSTLVNEVLYKSLAKH
INKSKVKPGDCDEIQGIEELERIIDIDQSPIGRTPRSNPATYTGVFDNIRDIFAQTNESK
VRGYTKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEICGGSRYNRETLEVTYKG
KNIADILAMTAEEATNFFEKVPKIHRKLKTLVDVGLGYVTLGQQATTLSGGEAQRVKLAS
ELHKRSTGRSIYILDEPTTGLHVDDIGRLLKVLNKLVENGDTVVIIEHNLDVIKMADHII
DLGPEGGDGGGTLVATGTPEQIAEVKESYTGQYLKPVLERDTVK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaccatccattgtagtaaaaggggctcgtgcccataatttaaaaggtgtagat
attgaaataccgaaagataaacttatcgtgatgacgggactgtctggatcaggaaaatct
tcacttgcctttgatacaatatatgctgagggtcagcgtagatatgtagagtcattaagt
gcttatgcaagacaatttttaggtcaaatggataaaccagatgttgatacgattgaaggt
ttatcacctgcgatatcaattgaccaaaagactacaagtaaaaatccaagatcaactgta
gcgacagtaactgaaatatatgactatatacggttgctctacgcacgtataggcaaacca
ttttgccccaatcatggtattgaaatagaatcgcaaactgtacaacaaatggtagaccaa
gtgatgcaacttgaagagcgttctaaaatccaactattggctcctgtggtttctcataga
aaaggtgcacaagaaaaactcatagacgacattagcaaaaaaggctatgtacgtgtacgt
gttgatggtgaaattatggatgtaaacgaagtgccaaatttagataaaaataaaaatcat
actatcgaagtcgtaatagatcgcttggtggttaaagcaggtattgaaggacgtcttgct
gattctatagaaactgcgattagacttgctgaaggtacattaatcgttgatataattggg
gtagaagaattaaaattctcggaaaaccatgcttgtccgatatgtggtttttcaattggt
gaactagaacctcgtatgttcagttttaacagcccctttggtgcatgtccaacatgtgat
ggtttaggattgaaattgaaagtagatttagatttagtggttcctgatacaaacaaaact
ttaaatgaaggtgcaatcatagcttgggaatcttcaagttctgatttttatccaacatta
ttaaatcgtgtttgtgaagtatataaaattaatatggataaaccatttaaaaaattaaca
gatagacaacaagatatcattttaaacggttctaaaggtaaagaaattgagttcactttt
aaacaacgcaatggtcaaacacgtaaacgaacaatggaatttgaaggtgtgattaataat
attaatcgtcgttatcatgactcaccatctgaacttgttagagagatgatgagtaaatat
atgactgagctaccttgtgaaacttgtaatggtaaacgtttaagccgtgaagcgttatct
gtatatgtttctggtcagaatattggtgaagttgttgaacattcaattaaagatgctttg
catatgtatgaacatattgaattgtcagatcaagatagaaaaattgcagatcaaatatta
aaggaaattaactcacgtttagaatttttatacaacgttggtttagaatatttaacactc
aatcgtgcatcaggatcattatcaggtggggaagcgcagcgaattcgccttgctacacaa
attggttctagactgtcaggtgtactttacgtgttagatgagccttctatcggacttcac
caaagagataatgatcgacttataagtacattaaaagaaatgcgtgacttaggtaatact
ttgatcgttgtagaacacgatgaagatacaatgcgtgcggctgattatttggttgatgta
ggcccaggtgcaggtgaacatggtggcgaaattgtcgcgagtggtacacctaaacaagta
atgaatcagaaaaaatcactcactggtcaatatttaagcgggaaaaagctgatagaagta
cctgaggaacgccgtgaaataactgatcgtaaagtcagtgttaaaggcgcaagaagtaat
aacttaaaagatatcgacgtagattttccattatcaacaatgacagtagttacaggtgtt
tctggttcaggtaagagtacgttagttaatgaagtgctgtataaatcattagcaaaacac
attaataaatcaaaagtaaaaccaggtgattgtgacgaaattcaaggaatagaagaactt
gaacgtataatcgatattgatcaatcacctattggaagaacaccgagatcaaatccagca
acttatacaggggtattcgataatattagggatatcttcgcgcaaacaaacgaatctaaa
gtaagaggatatactaaaggccgttttagctttaatgtgaaaggcggtcgttgtgaagct
tgtagaggtgacggtattataaaaattgaaatgcatttcttaccagatgtgtatgtaccg
tgtgaaatttgtggtggttctagatacaatagagaaacgctagaagtcacgtataaaggt
aaaaacattgcagatattttagcaatgacagctgaagaagcgactaatttctttgaaaaa
gtaccaaaaattcatcgtaaattgaaaacattagttgatgttggactaggatacgttaca
ctcggacaacaagcaacaacactttctggtggggaagcacaacgtgttaaactcgcatct
gaattgcataaacgttctacgggtcgctccatctatattcttgatgaaccaacgactggt
ttacatgttgatgatattggtcgattattaaaagtactcaataaactagtggaaaatggt
gatactgtggttattattgagcataacttagatgttattaaaatggcagatcatattatt
gacttaggtccagaaggtggcgatgggggcggtacgcttgtagctaccggtacgccagaa
caaattgcagaagtaaaagaaagttatacaggacaatacttaaagcctgtgctagaaaga
gatacagtaaaataa
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