Staphylococcus sp. AntiMn-1: AOB58_1209
Help
Entry
AOB58_1209 CDS
T09786
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stap
Staphylococcus sp. AntiMn-1
Pathway
stap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOB58_1209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stap03019
]
AOB58_1209
03400 DNA repair and recombination proteins [BR:
stap03400
]
AOB58_1209
Enzymes [BR:
stap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOB58_1209
Messenger RNA biogenesis [BR:
stap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOB58_1209
DNA repair and recombination proteins [BR:
stap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOB58_1209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANK38011
LinkDB
All DBs
Position
complement(1221091..1222869)
Genome browser
AA seq
592 aa
AA seq
DB search
MESTLSHYFGYDTFRPGQKEIITKVMNHQNALGVLPTGGGKSICYQVPGLMLGGTTIVIS
PLISLMKDQVDQLKAMGIRAAYLNSSLTQKQQKEIEAQLRKGEIQFLYVAPERFDNAYFV
QMVQQLNIPLVAFDEAHCISKWGHDFRPSYRDVIHKVFALPQDFTIVALTATATIEVQKD
IMDRLNINKNDEIKTSTKRRNLVFQVNPTYQRQKFVLEYVKKYQKESGIIYCSTRKQVEE
LQEALAINDIKSTTYHGGLSNKEREAAQNDFVYDRVRVVVATNAFGMGIDKSNVRFVIHY
NMPGDLESYYQEAGRAGRDGLNSDCILLFSERDIGLHQYFISSSKADDDYKDKMGEKLNK
MILYTKTKKCLEATLVHYFEPNEKLEECEQCSNCVRENKTYDMTNEAKMIVSCIARMKQK
ESYSVIIQVLRGEESDYIRYCDYNELSTHGIMKNYTTSDLSHLIDELRFKGFLNEYDEIL
TCDNSVKSLLSDQVTIFTTPFKRKTTEKVNINTVEGVDRALFDELIAVRKQLSEDLSIPP
VSIFSDFTLEEFAKRKPESKQDMILIDGVGSYKLKHYCPMFLETIQSYKAKI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaacattatcgcattattttggctacgatacatttcgtccgggtcaaaaagaa
attataacaaaagtaatgaatcatcaaaatgcgctaggtgtattacctactggcggggga
aaatcaatttgttatcaagttccgggattaatgttgggcggtacgacaatcgttatcagt
ccattaatttcgctaatgaaagatcaagttgatcaattaaaggccatgggtatacgcgcg
gcgtacttaaacagtagtttaactcagaaacaacaaaaagaaatagaggcacaacttaga
aaaggtgaaatccaatttctatatgtggcgcctgaacgtttcgataatgcttattttgtt
caaatggtgcaacaattaaatataccgttagttgcttttgatgaagcacactgtatttct
aaatggggtcacgattttagaccgagttatcgagatgtgattcataaggtatttgcatta
ccacaagattttacaattgtagcacttactgcaactgcgacaattgaagttcaaaaagac
attatggatcgcttgaatattaataaaaatgacgagattaaaacaagtacaaaacgtcga
aatctagtctttcaagtcaatcctacatatcaacgacaaaaatttgtgttggaatatgtt
aaaaaatatcaaaaagaatccggcattatttattgttcaacacgaaaacaagttgaagaa
ttacaagaagcgttagcgattaatgatattaagagtacaacctatcatggtggactatcg
aacaaagagcgtgaagctgcccaaaatgattttgtttatgatcgtgtacgcgtagttgta
gctacgaatgcttttggtatgggtatcgacaaatccaatgtaagatttgttattcattat
aatatgcctggcgatttagaatcatactatcaagaagcaggtcgtgcaggtcgtgatggc
ttaaatagtgattgtattttattatttagtgaacgtgacatcggcttacatcagtatttt
atatcttcatcgaaagcagatgatgattataaagataagatgggcgaaaaattaaataaa
atgatactttatacaaaaactaaaaagtgtttagaagcaacacttgtacattattttgag
ccgaatgaaaagcttgaagaatgtgaacagtgtagtaattgcgtaagagaaaataaaacg
tacgatatgacaaatgaagcaaaaatgattgtgagttgtattgcacgtatgaaacagaaa
gaaagctatagcgtcattatacaagtattaagaggcgaagaatctgattatattcgctac
tgtgattataatgaattgtcgacacatggtattatgaaaaactacactacatcagattta
agtcatcttattgatgaattgagatttaaaggctttttaaatgagtatgatgaaatatta
acttgtgataactctgtgaaaagtttattgagtgatcaagtcactatatttacgacgcca
tttaaacgtaaaactacagaaaaagttaatatcaataccgttgaaggtgtggatcgtgca
ctatttgatgaacttatagctgtacgtaagcagctaagtgaggacttgagtattccgcca
gtaagtatcttctctgattttacactagaagaatttgctaaaagaaagccagaatcaaaa
caagatatgattttaattgatggcgtaggtagttacaaattaaaacattactgtccaatg
ttcttagaaaccattcaatcttataaagcaaaaatataa
DBGET
integrated database retrieval system
