Staphylococcus sp. AntiMn-1: AOB58_1494
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Entry
AOB58_1494 CDS
T09786
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
stap
Staphylococcus sp. AntiMn-1
Pathway
stap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOB58_1494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stap03021
]
AOB58_1494
03400 DNA repair and recombination proteins [BR:
stap03400
]
AOB58_1494
Enzymes [BR:
stap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOB58_1494
Transcription machinery [BR:
stap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOB58_1494
DNA repair and recombination proteins [BR:
stap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOB58_1494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ANK38296
LinkDB
All DBs
Position
complement(1494790..1498413)
Genome browser
AA seq
1207 aa
AA seq
DB search
MIDVNNFHYMKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPSKDWEC
SCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEEVIYFASYVVVNPGPTGLEQKTLLSEAEFREYYDKFPGKFNAKMGAEGIKELLQ
EIDLDAELKQLRDELESATGQRLTRAIKRLEVVESFRHSGNNPAWMVLDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQCGLPKE
MALELFKPFIMKELVQREIATNIKNAKSKIERMDDEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLATTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKESVNTGAIFNDTNEVLKAYANGYVHLHSRIGVH
AKSFNNPTFTEEQNKKILLTSVGKVIFNEIIPDSFAYINEPTQTNLENKTPARYFISATE
LGEGGLKEYFDNQELIEPFNKNFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSTKAGI
TVGVSDIVVLPDKQEILDEHEKLVERITKQFNRGLITEFERYNAVVEIWTDAKDQIQQKL
MGSLDKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDEDCGTDRGLLVSDIKEGTEMI
EPFIERIEGRYSKETVRHPETDEVIVKPDQLVTADIAKQITDAGIESMYIRSAFTCNTRH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITEIEGVVDDIKIAKDRQQEIVIKGANESKSYLASGTSRLKVEVGQ
SVERGEVLTEGSIEPKNYLSVSGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHSFTDANRDAFKERKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDNLLGLKENVIIGKLIPAGTGMRRYRDVKYDTVAPNTTVSE
ESETTKI
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataatttccattatatgaaaataggacttgcttcacccgaaaaaatc
cgttcatggtcttttggtgaggttaaaaagccagaaacaattaactatcgtactttaaaa
ccagaaaaagatggtctattctgtgagagaatatttggaccttcgaaagactgggaatgt
agttgtggtaaatacaaacgtgtacgttataaaggtatggtttgtgacagatgtggagta
gaagtaactaagtcaaaagtgcgccgtgaaagaatgggccatattgaattagctgcgcct
gtatcacacatttggtacttcaaaggtattccaagtcgtatgggtcttttattagatatg
tcgccaagagcgttagaagaagttatttacttcgcttcttatgttgttgttaacccaggt
ccaactggtttagagcaaaagacattattatctgaagcagaattcagagagtactatgat
aaattcccaggtaaattcaacgccaaaatgggtgctgaaggtatcaaagaattactacaa
gaaatcgacttagacgctgaacttaaacaactaagagatgagttagaatcagcaacaggt
caaagacttacacgtgcaatcaaacgtttagaagtagttgaatcattcagacattcaggt
aataatccagcatggatggtgttagacgtacttccaattatcccaccagaaatcagacca
atggttcaattagatggtggacgttttgctacaagtgatcttaatgatttgtatcgtcgt
gttattaaccgtaacaaccgtttgaaacgtttattagacttaggtgctccaggcatcatc
gtccaaaacgaaaaacgtatgttacaagaagctgttgatgcacttatcgataatggtcgt
cgtggccgtccagttactggaccaggtaaccgcccattaaaatctctttctcatatgtta
aaaggtaaacaaggacgtttccgtcaaaacttattaggtaaacgtgttgactattcaggt
cgttcagttattgcagttggacctagcttgaaaatgtaccaatgtggactacctaaagag
atggcattagaattgttcaaacctttcatcatgaaagaattagttcaacgtgaaattgct
acaaacattaaaaatgcgaaaagtaagattgaacgcatggatgatgaagtttgggacgta
ttggaagatgttatcaaagaacacccagtacttttaaaccgtgcaccaacacttcacaga
ttaggtattcaagcatttgaacctacattagttgaaggtcgtgcaattcgtctacatcca
cttgctacaacagcttacaacgctgactttgatggtgaccaaatggcggttcacgtacca
ttatctaaagaagctcaagcagaagcacgtatgttaatgcttgcagcacaaaatatctta
aaccctaaagatggtaaaccagttgtaacaccttcacaagatatggtgctaggtaactat
tacttaactttagagcgtaaagaatcagtgaatactggtgcgatttttaatgatacaaat
gaagtgttaaaagcttatgcgaatggctacgtacacttacattcacgtattggtgtacat
gctaaatcatttaataatccaacatttactgaagaacaaaacaaaaaaatcttgttaact
tcagttggtaaagttatattcaatgaaatcattccggattcatttgcatatattaacgaa
ccaacacaaactaatttagaaaataaaacaccagctagatatttcatatctgctactgaa
ttaggtgaaggcggattaaaagaatacttcgataatcaagaattaattgaacctttcaat
aaaaatttcttaggaaatattattgcagaagtcttcaatcgtttcagcatcacagatact
tctatgatgttagacagaatgaaagacttaggattcaaattctcaactaaagcaggtatc
actgttggtgtatctgatatcgtagtattaccagataaacaagaaattttagatgaacac
gaaaaattagttgagagaattacgaaacaatttaatcgtggtttaatcactgaatttgaa
cgttataacgctgtcgttgaaatttggactgacgctaaagaccaaattcagcaaaaatta
atgggctcacttgataaaacaaacccaatctttatgatgagtgactctggtgcccgtggt
aacgcatctaactttacacagttagcaggtatgcgtggacttatggctgcaccatcaggt
aagattattgaattaccaatcacttcttcattccgtgaaggtttaacagtgttagagtac
tttatctctacccatggtgcgcgtaaaggtcttgccgatacagcacttaaaacagccgat
tcaggttaccttactcgtcgtcttgttgacgttgctcaagatgttattgttcgtgatgaa
gattgtggtactgaccgtggtctacttgtttctgatatcaaagaaggtacagaaatgatc
gaaccattcatcgaacgtattgaaggacgttattctaaagaaactgtccgtcatccagag
actgatgaagtaattgtaaaaccagatcaattagtaactgcagacattgctaaacaaatt
acagacgctggtattgaatcaatgtatatacgttcagcatttacatgtaatacacgtcac
ggtgtttgtgaaaaatgttacggtaaaaaccttgctactggtgaaaaagttgaagttggt
gaagcagttggtacaattgctgcacaatcaattggtgaaccaggtacacagcttacaatg
cgtacattccatacaggtggtgtagcaggtagtgatatcacgcaaggtcttccacgtatt
caagagatcttcgaagcacgtaatcctaaaggtcaagccgtgattacagaaatcgaaggt
gtcgttgatgacatcaagattgcgaaagaccgtcaacaagaaatcgttattaaaggtgct
aacgaatctaaatcatatttagcttcaggtacttcaagattgaaagttgaggttggtcaa
agcgttgaacgtggtgaagttctaactgaaggttcaatcgagcctaagaactatttatct
gtatcaggtttaaatgcaacagaaagttatctattaaaagaagttcaaaaagtttaccgt
atgcaaggtgtagaaattgatgataaacacgttgaagttatggttagacaaatgctacgt
aaagtacgcattattgaagctggagatactaagttacttccaggttcattagtagatatt
cacagctttactgatgcaaaccgtgacgcatttaaagaacgtaaacgtccagcaacagct
aaaccagtcttactaggtattacgaaagcgtctcttgaaacagaaagcttcttatcagca
gcttcgttccaagaaacaacacgtgtacttacagatgctgcaattaaaggaaaacgcgat
aacttacttggtcttaaagagaatgttatcataggtaaattaattccagctggtactggt
atgagacgttacagagacgttaaatacgacacagttgcaccaaatacaacagtttcagaa
gaatcagagacaactaagatataa
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