Staphylococcus sp. AntiMn-1: AOB58_258
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Entry
AOB58_258 CDS
T09786
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
stap
Staphylococcus sp. AntiMn-1
Pathway
stap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOB58_258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stap03400
]
AOB58_258
Enzymes [BR:
stap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AOB58_258
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AOB58_258
DNA repair and recombination proteins [BR:
stap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOB58_258
BRITE hierarchy
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ANK37060
UniProt:
A0A192F1R6
LinkDB
All DBs
Position
278399..279271
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIKPFVKGQTIESVTFSDKVHEGKANQRETIIKGLELDTFRRFTEHFT
ISDIDRRSKYIVFYLEKNGEERILISHLGMAGGFFVVDKIEDISVPNYRKHWHVIFKLNN
DKLLVYSDIRRFGEIRNVPSFEAYPSFLEIAPEPFDEEAMPHYLSWFNKKLYQNKSIKQM
ILDHRVISGCGNIYACEALFRAGIHPARLSKELNNQEREILFYYVRDVLEAGIKYGGTSI
SDYRHADGSTGTMQLHLNVYKQKICKVCGSDIETQVIATRNSHFCATCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaattaccagaagtagaacatgtaaaaagaggtattaagccttttgttaaagga
caaacaattgaatcagttactttttctgacaaagtgcatgaaggtaaagcaaaccaacgt
gagacgataattaaaggtttagaattagatacgttcagacgctttactgagcattttaca
attagtgatatagatagacgaagtaagtatatcgttttctacttagagaaaaacggtgaa
gaaagaatacttattagccatctaggtatggctggtggtttctttgtggtcgataagata
gaggatattagtgttccaaattatcgtaaacattggcatgttatatttaaattaaataat
gataagttgcttgtctattctgatattcgccgcttcggtgaaattagaaatgtgccatca
tttgaggcgtatccctcatttttagaaattgctccagaaccatttgatgaagaagcaatg
ccacattatttatcgtggtttaataaaaaactttaccaaaacaagtctattaagcaaatg
attttagatcatcgggtcatttccggctgtggtaacatttatgcgtgtgaagcgcttttt
agagcaggtatccatccagcgcgtctatcaaaagagttgaataatcaagaacgagaaata
ttattttattatgttcgagatgtattagaagcgggtataaaatatggtggaacgagcata
tctgattatcgtcatgcagacggtagtacaggtacgatgcaattacatcttaatgtttat
aaacaaaagatatgtaaagtgtgtggaagtgatattgaaactcaagttattgcaacgaga
aatagtcatttctgcgctacatgtcaaaaataa
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