Staphylococcus sp. AntiMn-1: AOB58_2665
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Entry
AOB58_2665 CDS
T09786
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
stap
Staphylococcus sp. AntiMn-1
Pathway
stap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOB58_2665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stap03019
]
AOB58_2665
03009 Ribosome biogenesis [BR:
stap03009
]
AOB58_2665
Enzymes [BR:
stap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AOB58_2665
Messenger RNA biogenesis [BR:
stap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOB58_2665
Ribosome biogenesis [BR:
stap03009
]
Prokaryotic type
rRNA helicases
AOB58_2665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
NAT10_TcmA_helicase
CMS1
AAA_30
HyfI_C
Cas3-like_C_2
Flavi_DEAD
vATP-synt_E
Motif
Other DBs
NCBI-ProteinID:
ANK39467
LinkDB
All DBs
Position
2710954..2712474
Genome browser
AA seq
506 aa
AA seq
DB search
MQKFKELGLSDKMAETLASMGFDDATPIQKESIPLALEGKDVLGQAQTGTGKTGAFGIPL
VEKVADKEGVQSLILAPTRELAMQVAESIREFAKGQNVQVVTVFGGMPIDRQIKSLKKGP
QIVVGTPGRVIDHLNRRTLKTNDVHTLILDEADEMMNMGFIDDMKFIMDKIPASQRQTML
FSATMPKAIQTLVQQFMKTPVIVKTMNNEMSNPQIEEYYTIVKELEKFDTFTNLLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQLDILVATDVA
ARGLDISNVSHVYNFDIPQDTESYTHRIGRTGRAGKKGVAITFVNPIEMDYIRQIEQANK
RQMTAMRPPHRKEVLKARENDIKGKVEKWMSRENEPRLQRIASELIEEYSDVDLVASLLQ
ELVESNDEVDVQLTFEKPLSRGKGGRQGRGPKRGGQGNNKRGNKFDNKNRRSKGGFNNNK
KNEKSSDRNNSNKKSMKGRTFADHKK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttaaagaattagggctctcagataagatggcagaaaccctagcatcaatg
gggttcgatgacgccactcctatacaaaaagagagtatccctcttgccttagaaggcaaa
gacgttcttggtcaagctcaaacaggcacaggtaaaactggtgcgtttggtattccactt
gttgaaaaagtggcagacaaagaaggcgtacaatcattaatccttgcaccaacaagagaa
ttagctatgcaagtagctgaatcaatcagagaatttgctaaaggtcaaaacgtacaagtt
gttactgtatttggtggtatgccgattgaccgtcaaatcaagtcacttaaaaaaggaccg
caaatcgttgtaggtacaccaggtcgtgtgattgatcaccttaaccgtcgtacattaaaa
actaatgatgttcatacgcttatattagatgaagcggatgaaatgatgaacatgggcttc
atcgatgatatgaaatttatcatggataaaattccagcttcacaacgccaaacaatgttg
ttttcagctacaatgccaaaagctattcaaacattagttcaacaattcatgaaaacacca
gtaattgttaaaacaatgaataacgaaatgtctaatccacaaatcgaagaatactataca
atcgtaaaagaattggaaaaattcgatacatttacgaatttattagatgtgcaccaacca
gaattagctattgtattcggccgtactaaacgtcgtgtagatgaattaacaagtgcgtta
atctctaaaggctacaaagctgaaggtttacatggtgacattactcaagcgaaacgtttg
gaagtattgaaaaaattcaaaaatgatcaattagatatcttagttgcaacagatgttgca
gcacgaggacttgatatttcaaacgtaagtcatgtttataactttgatattcctcaagat
actgaaagttatacacacagaatcggccgtactggtcgtgctggtaaaaaaggtgtagca
atcacatttgtgaacccaattgaaatggattacatccgtcagattgaacaagcaaacaag
agacaaatgactgcaatgagaccacctcatcgtaaagaagtgcttaaagcgcgtgaaaac
gatattaaaggtaaagttgaaaagtggatgtctagagaaaatgaaccaagattacaacgt
attgcttcagaattaattgaagaatatagtgatgttgatttagttgcttcattattacaa
gaattggttgaatcaaatgatgaagttgatgttcaattaacatttgaaaaaccattatct
cgtggtaaaggtggtcgtcaaggccgcggaccaaaacgtggcggtcaaggcaacaataaa
cgtggtaataaatttgataacaaaaatcgtcgttcaaaaggcggattcaacaataataag
aagaacgaaaagtcttctgatagaaacaatagcaataagaaatcaatgaaaggtcgcaca
ttcgctgaccacaaaaaataa
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