Staphylococcus sp. AntiMn-1: AOB58_681
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Entry
AOB58_681 CDS
T09786
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
stap
Staphylococcus sp. AntiMn-1
Pathway
stap03030
DNA replication
stap03430
Mismatch repair
stap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOB58_681
03430 Mismatch repair
AOB58_681
03440 Homologous recombination
AOB58_681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stap03032
]
AOB58_681
03400 DNA repair and recombination proteins [BR:
stap03400
]
AOB58_681
Enzymes [BR:
stap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOB58_681
DNA replication proteins [BR:
stap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOB58_681
DNA repair and recombination proteins [BR:
stap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOB58_681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
CCDC50_N
Motif
Other DBs
NCBI-ProteinID:
ANK37483
LinkDB
All DBs
Position
complement(708777..713093)
Genome browser
AA seq
1438 aa
AA seq
DB search
MAMTNQEKFKILADQIKITNHLEPEILEQSELTRVDVKTTDRTWVFQITLPHFLSIEDYL
LFTGAITEEFKSIANVECNITINNKSNQDEYAIKYFNHCIDQTQLSPKVKGQLKQKRLIM
SGDVLKVTCQNDIERDHFDKACNGSLVKAFQQCGFDISKIVFETDSVGNEDDLASLEAHI
QEEDEKSAREATEKLEKMKAEKAKQQDNNESSVTKCQIGKPIPIDNIKPIDSIIEEEFKV
AVEGVIFDINLKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLDNFKALSVGKWVRAQ
GRIEEDSFVRDLVMMMSDIEEIKKATKQDKSEEKRVEFHLHTAMSQMDGIPNISAYVDQA
AKWGHKAIAVTDHNGVQAFPDAHAAAEKNGIKMIYGMEGMLVDDGVPIAYKPMDRDLKTA
TYVVFDVETTGLSNQYDKIIELAAVKVKDGEIIDKFERFSNPHERLSDVIINLTHITDDM
LVDAPEIEEVLTEFKAWVGDAIFVAHNASFDMGFIDTGYEHVGIGASTNAVIDTLELSRT
INTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYMFIKMLKQLEELDVHNHQDINTSL
SNEDAYKRARPNHVTLIVQNQQGLKNLFKIVSASLVQYYYRTPRIPRSLLDEYREGILVG
SACDEGEVFTAVMQKDQSQVERIAQYYDFIEIQPPALYQGLIDRELIRDNETLYEIYNRL
IRAGEVNDIPVIATGNAHYLNEHDSIARKILIAAQPGNPLNRSTLPKAHFRTTDEMLDEL
HFLGEEKAYELVIKNTNELADRIERVVPIKDELYTPRMEGANEEIREMSYSNAKDLYGDD
LPQIVIDRLEKELESIIGNGFSVIYLISQRLVKKSLNDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICPKCKTSEFFDDGSVGSGFDLADKKCETCGSDLIKEGQDIPFETFLGFKG
DKVPDIDLNFSGEYQPNAHNYTKELFGDDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHK
RGAEVDRLVKGCTGVKRTSGQHPGGIIVVPDYMDIYDFTPVQFPADDQSSSWMTTHFDFH
SIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKETMGIFSSPEPLGVTQEEILC
KTGTFGVPEFGTGFVRQMLEDTKPTTFSELVRISGLSHGTDVWLGNAQDLIRSGKCDLAS
VICCRDDIMVYLMYNGLEPSLAFKTMEFVRKGKGLTDDMVEAMVDNEVPDWYLDSCRKIK
YMFPKAHAAAYVLMAVRIAYFKVHYPLYYYASYFTVRASDFDLITMIKDKESIRNTVNDM
YSRYMDLAKKEKDTLTVLEIMNEMAQRGFRMQPISLEKSKSFEFIIEGDTLIPPFISVPG
LGENVAQRIVEAREEGPFLSKEDLNKKAGLSQKVIEYLDELGSLPNLPDKAQLSIFDM
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgacaaatcaggaaaaatttaaaatcctagctgaccaaattaaaataacaaac
catttggaaccagaaattttggaacaaagtgaactaacgcgtgtggatgttaagacaaca
gatcgtacatgggtgtttcaaatcacattaccacactttctatcaatagaagattatttg
ctttttacaggtgcaattacagaagagtttaaatcaattgcaaatgtagaatgtaatatt
acgataaataataaatcaaaccaagatgaatatgcgataaagtattttaatcattgtatt
gatcaaacacaactttcacctaaagtaaaaggacaattaaagcaaaaacgcttaattatg
tcgggagatgtgctaaaagtaacttgtcaaaatgatatcgagagagatcattttgataaa
gcctgtaatggtagcttagttaaagcatttcaacagtgtggattcgatattagtaagata
gtttttgaaacggatagcgttggaaacgaagatgatttagcatcattagaagcacatatt
caagaagaagatgaaaagagtgcacgtgaagctactgaaaaattagaaaaaatgaaagcc
gagaaggcaaaacaacaagataataatgaaagttcggtaactaagtgtcaaattggtaaa
ccaatcccaattgataatattaaacctatagattctattattgaagaagaattcaaagta
gcagttgaaggtgttatttttgatattaacttaaaagagttgaagagtgggcgacacatt
gtagagttgaaggtaactgactatacagattcgctcgtattaaaaatgttcactcgtaaa
aacaaagatgatttagataactttaaggcattgagcgtcggtaaatgggttcgcgcacaa
ggacgcatagaagaagattcatttgttcgtgatttagtgatgatgatgtcagatattgaa
gaaattaaaaaagctacgaaacaagataaatctgaagaaaaacgagtagaattccatttg
catacggcaatgagtcaaatggatggcatacctaatatttcagcgtacgtagatcaagca
gcaaagtggggtcataaagctattgcagtgactgaccataatggtgtacaagcctttcca
gacgcacatgcggcagctgaaaaaaatggtattaaaatgatttacggaatggaaggtatg
ttggttgacgatggtgtacctattgcatacaaacctatggaccgtgatttgaaaaccgca
acatatgttgtattcgacgttgaaacgaccggtttatccaatcaatacgataaaattatc
gagctcgctgcagtcaaagttaaagacggggaaatcattgataagtttgaacgttttagt
aatccacatgaacgtttatccgatgttattattaatttgacacatattacggatgatatg
ttagttgatgctccagagatagaagaagttcttactgagtttaaagcatgggtaggggac
gctattttcgttgctcataacgcatcctttgatatgggctttatagatactggatatgaa
catgtcggtattggtgcgtctacaaacgctgtaatagatacacttgaattatcaagaaca
atcaatactgaatacggtaaacatggattgaacttcttagccaaaaaatacggcgtagag
ttaacacaacaccatagagcaatttatgatacggaagcaacagcttatatgtttattaaa
atgcttaaacaattagaagaacttgacgttcataatcaccaagatattaatacatcgtta
tcaaatgaagatgcatacaaacgtgcacgtccgaatcacgtcacgcttattgttcaaaat
caacaaggtcttaaaaacttattcaagattgtaagtgcgtccttagtccaatattattat
agaacacctagaattccacgttcattattagatgaatatcgtgaaggtattctcgttggt
tctgcatgtgacgaaggagaagtatttactgcagtaatgcaaaaagatcagtctcaagtt
gaacgtatagctcaatactatgatttcatagaaattcaaccgcctgctttataccaaggc
ttaattgatagagaactgatacgtgataatgaaacattatatgaaatatataatcgttta
attcgtgcgggtgaagtcaacgatattcccgttatagctacaggaaatgcacactatttg
aatgaacatgattcgattgcgcgtaaaatattgattgctgcacaacctggtaatccatta
aaccgttctacattgccaaaggcgcattttagaactacagacgaaatgttagacgaattg
cacttcttgggtgaagaaaaagcctatgaacttgtcattaagaatactaatgagctagca
gatcgtatagagcgtgttgttccaattaaagatgagctatatacaccaagaatggaaggc
gcaaatgaagaaattcgagaaatgagctattctaatgcaaaagacctctacggtgatgat
ttaccacaaattgtaattgatcgtcttgaaaaagaattagagagtattataggtaatggc
ttctctgttatatacctcatttcacaacgacttgttaaaaaatctttaaatgacggatat
ctcgttggttcacgtggttctgtaggatcaagttttgtagcaactatgacagaaatcaca
gaagttaatccattgccaccacattacatttgtccaaaatgtaaaacgagtgaattcttt
gatgatggctctgttggctctggttttgatttagcagataaaaaatgtgaaacttgtggc
agcgaccttattaaagaaggtcaagatattcctttcgaaacattcttaggctttaaaggc
gataaggtaccagatattgacttgaactttagtggagaatatcaaccgaatgcacataat
tatacaaaagaattatttggtgatgataaagtattccgtgctggaacaattggtacagtc
gcagagaaaacagcttttggttatgtgaagggttatttaaatgaccaaggtatccataaa
cgtggcgcagaagtagatagacttgttaaaggttgtacaggcgttaaacgtacatctgga
caacatccaggtggtattattgtagtacctgattatatggatatatatgatttcacacct
gtacagttcccagcggacgatcagtcttcatcttggatgacaacgcattttgatttccac
tccatacatgataacgttctaaagttagatatacttggacacgatgatccaacaatgatt
cgcatgttacaagacttatcaggaatagatcccaaaacaattccagtggatgataaagaa
acgatgggcatctttagttcgcctgaacctttaggtgttacacaagaggaaattttatgt
aaaactggcacgtttggtgtaccagaatttggtactggctttgttagacaaatgttagaa
gacacaaaaccaacaacattttcagaacttgttagaatatcaggattatcacatggtaca
gatgtatggttagggaacgctcaagatttaatacgttcaggtaaatgtgatttagcgagt
gtaatatgttgtcgtgatgatattatggtttatttaatgtataatggtttagagccgtca
cttgcctttaagacaatggaatttgtgcgtaaaggtaaagggttgactgacgatatggtc
gaagcaatggtagacaatgaagtacctgattggtatttagattcatgtagaaaaataaaa
tacatgttccctaaagcccatgccgcagcttatgtgttaatggcggtaagaattgcttac
tttaaagtacattatccactatattattatgcaagttatttcacagtacgcgcatctgac
tttgatttaattacaatgattaaagataaagaaagtattcgtaatactgttaatgatatg
tactcacgttatatggatttagctaaaaaagaaaaagatactttaacagtgcttgaaata
atgaatgaaatggcacaacgtggtttccgtatgcagccaatcagtttagaaaaaagtaaa
tcatttgaatttattattgaaggcgatactttgattccaccatttatatctgttccaggt
ttaggtgaaaacgttgcacaaagaattgtagaagctcgtgaagaaggtccatttttatct
aaagaagatttaaataaaaaagctggattatcacaaaaagtaatagaatacttagatgaa
ttaggttctttacctaatttacctgataaagcgcaattatcaatttttgatatgtaa
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integrated database retrieval system
