Staphylococcus sp. AntiMn-1: AOB58_911
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Entry
AOB58_911 CDS
T09786
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
stap
Staphylococcus sp. AntiMn-1
Pathway
stap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOB58_911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stap03019
]
AOB58_911
Messenger RNA biogenesis [BR:
stap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AOB58_911
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-ProteinID:
ANK37713
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Position
927860..929770
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AA seq
636 aa
AA seq
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MKQIHKNEVAVYALGGLGEIGKNTYAVEYQDEIVIIDAGIKFPDDNLLGIDYVIPDITYL
EQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLEEHHLLRTAKLI
EIDESSVIKSKHFEVSFYLTTHSIPEAYGVIVNTPEGNIVHTGDFKFDFTPVGEPANIAK
MAKLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVEKIFHDCNGRIIFATFASNIYRVQQ
AVEAAIKHNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINTVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYRAGAEVIHNKV
SNIHTSGHGSKGDQQLMLRLLRPKFFLPIHGEYRMLKAHGQSGVECGVEPDNVFIFDIGD
VLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFKTNKL
LSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNQNPEIQWHQIKSSIIETLQPYLF
EKTARKPMILPVIMKVNEDNNQSFAKKPSPKNDKPKNNNTKAPAKNPKPNNQNKKKTITI
TIQNLNLKKMKQINHLNHRSYKQSTHCQNNVWTVLL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaattcataaaaatgaagttgcggtttatgctcttggtggcttaggcgaaatt
ggtaaaaatacttatgccgttgagtatcaggacgaaatcgttattatcgatgcaggtatc
aaattccctgatgataatttattaggtattgactatgtcattcctgatattacttattta
gagcagaaccaagataaaattgttggtctgtttatcactcacggacatgaggaccatata
ggtggtgtgccctacctattaaagcaaattaatgtgcctatatatggtggaccattagct
ttaggtttaatcagaaataaattagaagaacatcatttattaagaactgcaaaacttatt
gaaattgatgaaagtagtgtcatcaaatctaaacattttgaagtttcattctatttaact
acacacagtattccagaagcatatggtgttatcgttaatacgccagaaggaaatattgtt
catacgggtgacttcaaatttgatttcacaccagttggtgaaccagcaaatatagctaaa
atggcaaaattaggtgaagaaggcgtcctttgtttgctttctgactctaccaattcactt
gtaccagattttactttaagtgaacgtgaagtcggccaaaatgttgaaaagatattccat
gattgtaatggacgaatcatattcgccacatttgcatcaaacatctatcgtgttcaacaa
gcagttgaagctgcaattaaacacaaccgtaaaattgttacatttggtcgttcaatggaa
aacaacattaagattggtatggaattaggctatatcaaagcaccaccagaaacgtttgtt
gaaccaaataaaattaataccgtgcctaagcatgaattattgattctatgtacaggttct
caaggtgaaccaatggcagcattatctagaattgccaacggtacgcataaacaaattaaa
atcatcccggaagatacagttgtatttagttcttcacctattccaggtaatacgaaaagt
attaatcgcacaataaattcactttatcgtgccggtgcagaagttattcataataaagta
tctaatattcatacttctggtcacggttctaaaggcgatcaacagttaatgttacgtctg
ttacgtcctaagttctttttaccaatccatggtgaataccgtatgctaaaagcgcatggt
caatcaggtgttgagtgtggcgttgaaccagataatgtatttatttttgatataggtgat
gtcttagcactgacacatgattctgctagaaaagctggtagaataccatcaggtaatgta
ttagttgatggtagtggtattggtgatatcggtaatgtagttattcgtgatcgtaaacta
ttatcagaagaaggtttagtgattgttgttgtaagtatagacttcaaaacaaacaaacta
ctttctggacctgatattatctcacgtggttttgtatacatgcgtgaatctggacaattg
atttatgatgcacaacgtagaatcaaaacggatgttatttcaaaattaaatcaaaaccca
gagattcaatggcatcaaattaaatcgtcaatcattgaaacgttacagccttatctattt
gaaaagactgcacgtaaaccaatgatcttaccagtcattatgaaagtaaatgaagataac
aaccaatcatttgctaagaaacctagccctaaaaatgacaaacctaaaaacaacaacacg
aaagcaccagcaaaaaatccaaaacctaacaatcaaaacaagaaaaaaacaataacaata
acaatccaaaacctaaacctaaaaaagatgaaacaaatcaatcatctgaatcataggtct
tataaacagtccacacattgtcaaaacaatgtgtggactgttttgctatga
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