Starkeya sp. ORNL1: G3545_02670
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Entry
G3545_02670 CDS
T06785
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
star
Starkeya sp. ORNL1
Pathway
star03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
star00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3545_02670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
star03400
]
G3545_02670
Enzymes [BR:
star01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
G3545_02670
DNA repair and recombination proteins [BR:
star03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G3545_02670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Dehalogenase
DUF2256
Motif
Other DBs
NCBI-ProteinID:
QJP12660
UniProt:
A0A858WSI5
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All DBs
Position
complement(547579..548241)
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AA seq
220 aa
AA seq
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MFAADAGPVAGAGTEPTRDCPRCPRLVAFREQWRAVEHDWHNAPVPSFGNADARLLIVGL
APGLRGANRTGRPFTGDYAGDLLYSTLIQYGFADGHFEARADDSLRLIGTRITNAVRCVP
PENKPTTDEMKTCRPFLHATIAGMLQLQAIVALGKIAHDQVLAAHGERLSRFKFAHGAAH
EIGGLRLFDSYHCSRYNTNTGVLTPAMFHTVFAAVKAHLA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctgccgacgctggtcccgttgcgggcgccggcaccgagccgacgcgcgactgc
ccgcgctgcccgcggctcgtggccttccgcgagcaatggcgtgccgtcgagcatgactgg
cacaatgcgccggtgccgtccttcggtaacgcggatgcgcgcctgctgatcgtcggcctc
gcgcccggcttgcgcggcgccaaccgcaccggccggccgttcaccggtgactatgccggc
gacctgctctattcgacgctgatccaatacggctttgccgatggccacttcgaagcgcgg
gcggacgatagtctgcgcctcatcggcacccgcatcaccaatgcagtgcgttgcgtgccg
ccggagaacaagccgaccaccgacgagatgaagacctgccggccgttcctacacgccacc
atagccggcatgctacagctgcaagcgatagttgcacttggaaagattgcgcacgatcag
gtgctggcggcacatggcgagaggctgtcgcggttcaagtttgcacacggcgcggcgcac
gagatcggcgggctccggcttttcgacagctaccattgctcccgctacaacacgaacacc
ggcgtgctgacgccggcgatgttccacacggtgtttgccgcggtgaaggcgcatctcgct
taa
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