Starkeya sp. ORNL1: G3545_02725
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Entry
G3545_02725 CDS
T06785
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
G3545_02725 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
star03019
]
G3545_02725 (rnc)
03009 Ribosome biogenesis [BR:
star03009
]
G3545_02725 (rnc)
03036 Chromosome and associated proteins [BR:
star03036
]
G3545_02725 (rnc)
Enzymes [BR:
star01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
G3545_02725 (rnc)
Messenger RNA biogenesis [BR:
star03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G3545_02725 (rnc)
Ribosome biogenesis [BR:
star03009
]
Eukaryotic type
90S particles
RNase
G3545_02725 (rnc)
Prokaryotic type
rRNA processing factors
G3545_02725 (rnc)
Chromosome and associated proteins [BR:
star03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
G3545_02725 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QJP12670
LinkDB
All DBs
Position
556202..556921
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AA seq
239 aa
AA seq
DB search
MSKGSKRAAGDGDYSELEEQLGHVFADRGHLALALTHISAITALTGPAARLKSYQRLEFL
GDHVLGMVVSDMLYRAFPQADEGDLSRRLAELVCEEACAEVGLAMGLGPFIRLGAGEARS
GGHQRPTILADIAEAVLAAVYLDAGYPAAAEMVERFWRPRFAALKGLVRDAKTALQEWAQ
ARGLPPPVYHVVERQGPDHNPEFRVAVEIPGYDRVEGVGSSKQGAQKAAAGVFLEQVKA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaggcagcaagcgggcggccggcgacggcgactattccgagctcgaggaacaa
ctcgggcatgtctttgccgatcgcggccatcttgcgctcgctctgacccatatcagcgcc
atcaccgcgctcaccgggccggcggcgcggttgaaaagctaccagcggctggagttcctc
ggcgaccatgtgctcggcatggtggtttccgacatgctctatcgggcctttccgcaggcc
gacgagggcgacctgtcacgccggctcgccgagctggtctgcgaggaggcgtgcgccgag
gtcgggctggcgatggggctcggacccttcatccggctcggcgccggcgaggcacgctcc
ggcggccatcagcggccgaccatcctggccgatatcgccgaggcggtgctggcggcggtg
tatctcgacgccggatatcccgcggcggcggagatggtggaacgcttctggcgcccgcgc
ttcgccgctctcaaggggctggtccgcgacgccaagaccgccttgcaggaatgggcgcag
gctcgcggcttgccgccgccggtctatcatgtggtggaacggcaggggccggaccacaat
cccgaattccgcgtcgccgtcgagattcccggctatgatcgggtcgaaggcgtcggcagc
tcgaagcagggcgcgcaaaaggcggcggcgggcgtcttcctcgaacaggtcaaggcatga
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