Starkeya sp. ORNL1: G3545_02815
Help
Entry
G3545_02815 CDS
T06785
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
star
Starkeya sp. ORNL1
Pathway
star00260
Glycine, serine and threonine metabolism
star00460
Cyanoamino acid metabolism
star00630
Glyoxylate and dicarboxylate metabolism
star00670
One carbon pool by folate
star00680
Methane metabolism
star01100
Metabolic pathways
star01110
Biosynthesis of secondary metabolites
star01120
Microbial metabolism in diverse environments
star01200
Carbon metabolism
star01230
Biosynthesis of amino acids
star01240
Biosynthesis of cofactors
star04981
Folate transport and metabolism
Module
star_M00140
C1-unit interconversion, prokaryotes
star_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
star00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G3545_02815
09102 Energy metabolism
00680 Methane metabolism
G3545_02815
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G3545_02815
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
G3545_02815
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
G3545_02815
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
G3545_02815
Enzymes [BR:
star01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
G3545_02815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QJP12687
UniProt:
A0A858XDI7
LinkDB
All DBs
Position
575609..576910
Genome browser
AA seq
433 aa
AA seq
DB search
MSSLANTVADTATFFSAPLDETDPELAGAIRAELGRQRDEIELIASENIVSRAVLEAQGS
VLTNKYAEGYPGRRYYGGCQYVDVAETLAIERAKKLFGAGFANVQPHSGAQANTAVFFAL
MQPGDTFLGLNLAAGGHLTHGAPVSLSGKWFKPVPYNVRQDDQRIDYEEVAKLADEHKPK
VIIAGGSAYPRHIDFVKMRAIADSVGAYLMVDMAHFAGLVAGGVHPNPVPHAHVTTTTTH
KTLRGPRGGMILTNDEDLAKKVNSAIFPGTQGGPLMHVIAAKAVAFGEALRPEFKLYAKN
VVENAKALAENLKGHGFSIVSGGTDTHLMLVDLRPKKLTGKVSEAALGRAHITCNKNGIP
FDPEKPMVTSGVRLGTPAGTTRGFGVAEFQQVGDMIAEVLDVLSQKGTDEDSLVEAAVRE
KVAGLLARFPIYN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcttgccaatacggtcgcggataccgcgacgttcttctccgcgccgctcgac
gagaccgatccggagctcgccggcgcgattcgcgccgagctcggtcgccagcgcgacgag
atcgagctgatcgcctccgagaacatcgtctctcgggccgtgctcgaagcgcagggctcc
gtgctcaccaataaatatgccgaaggctatccgggccgccgctattatggcggttgccag
tatgtcgacgtcgccgagacgctcgccatcgagcgcgccaagaagctgttcggcgccggc
tttgccaatgtgcagccgcattcgggcgcgcaggccaacactgcggtgttcttcgcgctg
atgcagcccggcgataccttcctcggcctcaacctcgccgccggcgggcacctgacccat
ggcgcgccggtgagcctctccggcaagtggttcaagccggtgccctataatgtgcgccag
gacgaccagcgcatcgattatgaggaagtggccaagctcgccgacgagcacaagccgaag
gtcatcatcgccggcggctcggcctatccgcgccatatcgacttcgtgaagatgcgcgcc
atcgccgactcggtcggcgcctatctcatggtcgacatggcgcatttcgctggtctggtc
gcaggcggcgtgcatccgaacccggtgccgcacgcccatgtcaccaccacgaccacccac
aagacgctgcgcggcccgcgcggtggcatgatcctcaccaatgacgaggacctggcgaag
aaggtcaactctgccatcttcccgggcacccagggcggcccgctgatgcatgtcatcgcc
gccaaggcggtggcgttcggcgaggcgctgcgtcccgagttcaagctttacgcgaagaac
gtcgtggaaaatgccaaggcgcttgcggaaaatctcaagggccatggcttttccatcgtc
tccggcggcaccgatacgcatctgatgctggtcgatctccgcccgaagaagctcaccggc
aaggtgtcggaggccgcgctcggccgtgcccacatcacctgcaacaagaacggcatcccg
ttcgacccggaaaagccgatggtcacctccggcgtgcgcctcggcaccccggccgggacc
acgcgcggcttcggcgttgccgagttccagcaggtcggcgacatgattgccgaggtgctc
gacgtgctctcgcagaagggcaccgacgaggacagcctggttgaggccgcggttcgcgaa
aaggtggcgggactattggcgcggttccccatctataattga
DBGET
integrated database retrieval system