KEGG   Starkeya sp. ORNL1: G3545_03270
Entry
G3545_03270       CDS       T06785                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
star  Starkeya sp. ORNL1
Pathway
star03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:star00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    G3545_03270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:star03400]
    G3545_03270
DNA repair and recombination proteins [BR:star03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     G3545_03270
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QJP12765
UniProt: A0A858WQW1
LinkDB
Position
complement(671668..672540)
AA seq 290 aa
MAPRANWKGYLKIAELTCPVALFTAASTSDRIAFHTINRATGHRVHRQFVDVDTGKPVEK
DDQVKGYEVGRGDYVMLEPEEVASVVPESDKKLDVSAFIPFAEIDDVYFDKPYYLAPSDK
TATEAFILIREGMRKKKVAAIAQAVLFRRVRTLLIRADGDGLIANTLNFDYEVRSAKEAF
DGVPEMKTKDEMLDLARHIIETKKGSFDPSAYEDRYEAALAELVKAKLEGRKIEVRKAPR
REKVVDLMAALRESAGLGGKKTATKTAASKSAKPAVSKSAKPAAPRRKAS
NT seq 873 nt   +upstreamnt  +downstreamnt
atggcaccgcgggcgaactggaagggctatctgaagatcgccgagctcacctgcccggtg
gcgctcttcaccgccgcctcgacctccgaccgcatcgccttccacaccatcaaccgcgcg
accggacaccgcgtccatcgccagttcgtcgatgtcgacaccggaaagccggtggagaag
gacgaccaggtcaagggctacgaggttggccggggcgattatgtgatgctggaaccggag
gaagtcgcctccgtggtgccggaaagcgacaagaagctggatgtctccgccttcattccc
ttcgccgagatcgacgacgtctatttcgacaagccctattatctcgcgccgtccgacaag
acggcgaccgaagccttcatcctcatccgcgaaggcatgcgcaagaagaaggtggccgcg
atcgcacaagccgtgctgttccggcgtgtgcgcaccttgctgatccgcgctgacggcgac
gggctgatcgcgaacacgctcaatttcgactacgaggtgcggtccgcgaaggaagcgttc
gacggcgtgcccgagatgaagaccaaggacgagatgctcgacctcgcccggcacatcatc
gagaccaagaaaggctcgtttgacccatctgcctatgaggatcgctacgaggcggccttg
gccgaactggtcaaggccaagctcgaaggccgtaagatcgaggtccgcaaggcgccgcgg
cgcgagaaggtcgtggacctcatggcggcgctgcgcgaaagcgccgggcttggcggcaag
aagacagcgacgaagaccgcggcgtccaaatcggcgaagcctgcggtatccaagtcggcg
aagcccgccgcgccgcgccggaaggcgagttga

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