Starkeya sp. ORNL1: G3545_04090
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Entry
G3545_04090 CDS
T06785
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
star
Starkeya sp. ORNL1
Pathway
star00541
Biosynthesis of various nucleotide sugars
star01100
Metabolic pathways
star01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
star00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G3545_04090 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
star01005
]
G3545_04090 (kdsA)
Enzymes [BR:
star01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
G3545_04090 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
star01005
]
Lipid A
G3545_04090 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QJP12912
UniProt:
A0A858WWX0
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Position
854915..855781
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AA seq
288 aa
AA seq
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MSGHESGQKGGTAANATVTVGDVRFANHLPLALIAGPCQMESRAHALECAAALHEIAGRR
GIGLVFKTSFDKANRTSIKGARGMGLKAALPVFAEVRERYGMPVLTDIHEIEQCVPVAEV
VDILQIPAFLCRQTDLLIAAAHTGRTVNVKKGQFLAPWDMKNVVAKLTDSGNPNVLVTER
GASFGYNTLVTDMRALPIMAETTGAPVIFDATHSVQQPGGQGTSSGGQREFVPVLARAAV
AVGVAGVFIETHPDPDHAPSDGPNMVPLKDFEALLERLQAFDRVAKAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccacgagagcggccagaagggcggcaccgccgccaacgccaccgtcacggtc
ggcgatgtgagattcgccaaccatctgccgctcgccttgatcgccggcccctgccagatg
gaaagccgcgcccatgcgctcgaatgcgcggcggcgctgcacgagatcgccgggcggcgc
ggtatcggccttgtcttcaagacctcgttcgacaaggccaaccgcacctcgatcaagggc
gcccgtggcatgggcctcaaggcggcgctgccggtgttcgccgaggtgcgcgagcgctac
ggcatgccggtgctcaccgacatccacgagatcgagcagtgcgtgccggtcgcggaagtg
gtcgacatactgcagataccggccttcctctgccgccagaccgacctgctgatcgccgcg
gcgcataccggacgcacggtgaatgtgaagaagggccagttcctggcgccctgggacatg
aagaacgtcgtcgccaagctgaccgacagcggcaatcccaatgtgctggtgaccgagcgg
ggcgcgtccttcggctacaacactctggtcaccgacatgcgggcgctgccgatcatggcc
gaaaccaccggagccccggtgatcttcgacgccacgcattcggtccagcagccgggcgga
caaggcacctcctcgggcggccagcgcgagttcgtgccggtgctggcgcgggccgcggtc
gcggtcggagtcgcgggggtgttcatcgagactcaccccgatcccgaccacgccccctcc
gacggaccgaacatggtgccgctgaaggatttcgaggcgctgctggaacggctgcaggcc
ttcgaccgggtggcgaaggcggcgtag
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