Starkeya sp. ORNL1: G3545_09095
Help
Entry
G3545_09095 CDS
T06785
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
star03000
]
G3545_09095
Transcription factors [BR:
star03000
]
Prokaryotic type
Helix-turn-helix
Other families
G3545_09095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_lid_14
HTH_30
AAA_2
HTH_psq
AAA
HTH_23
Mg_chelatase
AAA_16
HTH_28
HTH_29
HTH_1
AAA_7
AAA_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QJP13801
LinkDB
All DBs
Position
1868050..1869897
Genome browser
AA seq
615 aa
AA seq
DB search
MRMEASSRTVLAARRQFFQQGKLADALVSAPILRSWQRCAERGLDNARLPHIEPLTAREL
REATGPHERLRRLCRPEVESLYSDAMATGCVVILTDDNGLILETLGSAGFAARAAQVALR
PGVPWCETATGTNAVGTALVEGRPIAVHGGEHYFEPHGILSCSAAPIFDPYGRIVGALDL
SGPASVDHRHALGLVRMAVAQIEHRFFDEDFRGRRVLRFQSDPALLGTAREGILVFEDDR
LVAANRSGLGLLDIDWSALGARGIGELFGEVPHDGGRTGRLIDAAGRELFGSVDGSTGAT
VTAPPRIAHPRRGEGALVPVLDGPTHVAVLRAVRLLEADVPVLIRGETGTGKEMVARDIH
RRSSRASGPFVAVNCAAIPETLIEAELFGYEEGAFTGARRQGRKGLLREAQGGVLFLDEI
GDMPLALQARLLRVLQEREVSPLGGGRSVKVDFALVCATHRDLNAATDAGAFRSDLYFRI
AHYTIGLPALRDLPDRLAIVRALWRRLAGDERLSLSPDCEHHLAGLEWPGNFRQLVGTLR
VLAALAEPFEPVPLDMLPADIATPARRSQADGAQLDAITRDAMQRTLDACGGNVSRAARE
LGINRSTLYRRLLNN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcggatggaggcctcttcgcggacggtgcttgccgcgcgccggcagttcttccagcaa
ggcaagctggcggacgcgctggtttccgcgccgatcctgcggtcgtggcagcgctgcgcc
gaacgcggcctcgacaacgcccgcctgccgcacatcgagcccctgaccgcccgtgaactg
cgcgaggccaccggaccgcacgagcggctgcgccggctgtgccggccggaggtcgaaagc
ctctattccgacgccatggcgaccggctgcgtcgtcatcctgaccgacgacaacgggctc
attctggaaacgctcggcagtgccggcttcgccgcacgggccgcgcaggtcgcgctgcgc
cccggcgtgccgtggtgcgagaccgcgaccggcaccaatgccgtcggcaccgccctggtc
gagggccgtcccatcgccgtccacggcggcgagcattatttcgagccgcacggcatattg
agctgctcggccgcgcccatcttcgatccttatggccgtatcgtcggggcgctcgacctt
tcgggtccggccagcgtcgaccaccgccatgcgctcggcctggtgcggatggccgtcgcg
cagatcgagcatcgcttcttcgacgaggatttccgcggcaggcgcgtgctgcgcttccag
tccgatccggcgctgctcggtaccgcgcgcgagggcatcctggtgttcgaggacgaccgg
ctggtggcggcgaaccgcagcggcctcggcctgctggacatcgactggtcggcgctcggc
gcgcggggcatcggggaattgttcggcgaggtcccgcatgacggtggccggaccggtcgg
ctcatcgatgccgccggccgcgaactgttcgggagcgtcgatggatcgacaggcgccacc
gtcacggcgccgccccgcatcgcgcatccgcggcgtggcgaaggcgcgctcgtcccggtg
ctcgacggtcccacccatgtcgccgtgctgcgcgccgtccggctgctggaagcggacgtg
ccggtgctgatccgcggcgagaccgggaccggcaaggagatggttgcgcgggatatccat
cgccgcagttcgcgggcgagcgggccgttcgtcgcagtcaattgcgcggcgatcccggag
acgctgatcgaggcggaattgttcggctatgaggaaggcgccttcaccggcgcccgccgg
cagggccgcaagggcctgctgcgcgaggcgcagggcggcgtgctgttcctcgacgagatc
ggcgacatgccgctcgccctgcaggcccggctgctgcgcgtgctgcaggagcgggaagtg
tcgccgctcggcggcggtcggtcggtgaaggtcgatttcgccttggtctgcgccacccat
cgcgatctcaacgcggctaccgatgccggcgctttccgctccgacctctatttccgcatc
gcccactacacgatcggcctgccggcgctgcgcgacctgccggaccggctcgcgattgtc
cgggcgctttggcgcaggctcgccggcgacgagcggctgtcgctctcgcccgactgcgaa
caccatctcgccggcctcgaatggccaggcaatttccgccagctggtcggcaccctgcgc
gtcctcgcggcgcttgccgagcccttcgagccggtgccgctcgacatgctgccggccgac
attgcgacgccggcccggaggtcgcaggcggatggagcgcagctggacgccatcacccgc
gacgccatgcagcgcaccctggacgcctgcggcggcaatgtctcgcgcgccgcccgcgag
ctcggcataaaccgcagcacgctttatcggcgactgctgaacaactga
DBGET
integrated database retrieval system
