Starkeya sp. ORNL1: G3545_09190
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Entry
G3545_09190 CDS
T06785
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
star
Starkeya sp. ORNL1
Pathway
star02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
star00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
G3545_09190 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
star02000
]
G3545_09190 (choX)
Transporters [BR:
star02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
G3545_09190 (choX)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
QJP13817
LinkDB
All DBs
Position
1892661..1893605
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AA seq
314 aa
AA seq
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MIIKRLVACLSLSATLMSAPAFAGDPASCAKPRFSDVGWTDISATTAIANQLLQNLGYKP
NVVILSVAVTFKSLENSDVDVFLGNWMPLQEPTQVPLVKAGKIEVAGTNLKDARIGFAVP
KTAYDAGLKTYADIAKFKDQLGGKIYSIEAGSSANQTISKMIADNTFGLAGFTLVESSEQ
AMLSQVSHKIKQKEPVVFFGWRPHPMNINIPMAYLANGNDVFGPNDGGASVLTLTRAGYV
KECPNVGRFLSNLVFDVAMEDRLMSDILDKNMQPDAAAKAWIKQNPAVLERWLDGVTTLD
GKPGIAAVKSGLGM
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaaacggctcgttgcctgcctcagcctatccgccacgctgatgtcggccccc
gccttcgccggggacccggcatcctgcgccaagcctcgcttctccgatgtcggctggacg
gacatctccgccaccaccgcgatcgcgaaccagctgctgcagaatctcggctacaagccg
aacgtcgtcatcctctccgtcgccgtcaccttcaagtcgctggagaacagcgacgtggac
gtgttcctcggcaactggatgccgctgcaggagccgacccaggttccgctggtgaaggcc
ggcaagatcgaagtcgccggtaccaacctcaaggatgcgcgcatcggcttcgccgtgccg
aagaccgcctatgatgcgggcctcaagacctatgccgacatcgccaagttcaaggaccag
ctcggcggcaagatctacagcatcgaagccggcagcagcgccaaccagaccatctccaag
atgatcgccgacaacaccttcgggctcgccggcttcaccctggtggaatccagcgagcag
gcgatgctctcgcaggtctcgcacaagatcaagcagaaggagccggtggtgttcttcggc
tggcgcccgcacccgatgaacatcaacatcccgatggcctatctcgccaacggcaatgac
gtgttcggccccaatgacggcggggcgagcgtgctcacgctcacgcgggccggctatgtc
aaggaatgcccgaatgtcgggcgcttcctttccaacctggtgttcgacgtcgccatggaa
gatcgcctgatgagcgacatcctcgacaagaacatgcagcccgacgccgcggccaaggcc
tggatcaagcagaaccccgccgtgctcgagcgctggctcgacggcgtgaccacgctcgac
ggcaagcccggcatcgccgcggtgaagagcggcctcggcatgtag
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