Starkeya sp. ORNL1: G3545_09355
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Entry
G3545_09355 CDS
T06785
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
star03000
]
G3545_09355
Transcription factors [BR:
star03000
]
Prokaryotic type
Helix-turn-helix
LysR family
G3545_09355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
MarR_2
HTH_20
HTH_5
HTH_24
HTH_28
HTH_50
HTH_11
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QJP13844
UniProt:
A0A858WZM9
LinkDB
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Position
complement(1927187..1928056)
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AA seq
289 aa
AA seq
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MNFAQLRAFQAIATHRTFSEAAQALGVSQPAITQHVKSLEEAVGARLFVRTGAGIELTPD
ARDLLPRIRQVMLMLDDIGARMDEGRALSAGYLALGLCAPYVAMPILERFTALYPGVRLD
VRLENSSTLLDMVAQHRVDVAIATLEAPDPDFACDRLLDQEVLVLVHDAHPWWGRAAVGV
RELVGQRFVQREAGSMTRHLFEAALARHGIEIAPHLVLGSREAVKEAVAAKIGLGIVLNR
ELGFDPRLHAVAIADAPARADEYLVTRKENRQLGAVAAFAAVAREVFGA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcccagctccgtgccttccaggccatcgccacccaccgcaccttttccgaa
gccgcgcaggcgctgggggtgagccagccggccatcacccagcatgtgaaatcgctggag
gaggcggtgggcgcgcggctgttcgtgcgcaccggcgccggcatcgagctgacgccggac
gcgcgcgatttgctgccgcggatacggcaggtgatgctgatgctggacgacatcggcgcg
cgcatggatgagggccgcgcgctcagcgccggctatctcgcgctgggcctgtgcgcgccc
tatgtggcgatgccgatcctggagcgcttcaccgcgctctatcccggggtgcggctcgat
gtgcggctggagaattcctcgacgctgctcgacatggtggcgcaacatcgcgtcgatgtg
gcgatcgcgacgctggaagcgccggacccggatttcgcctgcgaccggctgctcgaccag
gaagtgctggtgctggtgcacgacgcccatccctggtgggggcgcgcggcggtcggcgtg
cgggaactggtggggcagcgcttcgtgcagcgcgaggccggctcgatgacgcgccatctg
ttcgaggcggcgctggcccgccacggcatcgagatcgccccgcatctggtgctcggcagc
cgcgaggcggtgaaggaggcggtggcagcaaagatcggcctcggcatcgtgctgaaccgc
gaactggggtttgatcccaggctgcacgcggtggcgatcgccgacgcgccggcgcgggcc
gacgagtacctggtgacgcggaaggagaaccgtcagctgggcgcggtggctgcgttcgcg
gcggtggcgcgggaagtgttcggggcctga
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