KEGG   Starkeya sp. ORNL1: G3545_11970
Entry
G3545_11970       CDS       T06785                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
star  Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:star00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:star03016]
    G3545_11970
Enzymes [BR:star01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     G3545_11970
Transfer RNA biogenesis [BR:star03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    G3545_11970
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: QJP14302
UniProt: A0A858X0T2
LinkDB
Position
complement(2487593..2488225)
AA seq 210 aa
MTIRLHRGDLADLSLYTPERAPVVAIDTETLGLNPHRDRLCVVQLSPGDGTADVVQIPQG
SGPGSAPNLERLLADPGIVKLFHFGRFDIAVLSKNLGVEVRPVWCTKIASKLSRTYTDRH
GLKELVRELLGIDISKQQQSSDWAADDLTEAQLQYAASDVLYLHALQAKLAAMLAREGRT
ALAGACFDFLPTRAALDLAGWPEEDIFAHS
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaccatacgcctgcaccgcggcgatctcgccgatctcagcctctatacgcccgagcgc
gctccggtcgtcgccatcgacaccgagacgctcggcctgaacccgcaccgcgaccggctg
tgcgtggtacagctctcgccgggcgacggcaccgccgacgtggtgcagatcccgcagggc
tcgggccccggcagcgcgcccaacctggaacgcctgctggcggatcccggcatcgtcaag
ctgttccatttcgggcgattcgatattgcggttttgtcgaagaatctgggcgtcgaggtc
cgcccggtgtggtgcacaaagatcgcttcgaaactttctcgtacttataccgaccgccac
gggctgaaggagttggtgcgcgaactgctcggcatcgacatctccaagcagcagcagagc
tcggactgggcggcggacgatctcaccgaggcgcagctgcaatacgccgcctccgatgtg
ctctatctccatgcgttacaagcgaaacttgccgccatgctggcgcgcgagggccgtacc
gcgcttgccggtgcgtgcttcgatttcctgccgacccgcgccgcgctcgacctcgccggc
tggccggaggaggatattttcgcgcattcatga

DBGET integrated database retrieval system