Starkeya sp. ORNL1: G3545_12420
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Entry
G3545_12420 CDS
T06785
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
star
Starkeya sp. ORNL1
Pathway
star03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
star00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3545_12420 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
star03019
]
G3545_12420 (groL)
03110 Chaperones and folding catalysts [BR:
star03110
]
G3545_12420 (groL)
03029 Mitochondrial biogenesis [BR:
star03029
]
G3545_12420 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
star04147
]
G3545_12420 (groL)
Enzymes [BR:
star01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
G3545_12420 (groL)
Messenger RNA biogenesis [BR:
star03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
G3545_12420 (groL)
Chaperones and folding catalysts [BR:
star03110
]
Heat shock proteins
HSP60 / Chaperonin
G3545_12420 (groL)
Mitochondrial biogenesis [BR:
star03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
G3545_12420 (groL)
Exosome [BR:
star04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
G3545_12420 (groL)
Exosomal proteins of other body fluids (saliva and urine)
G3545_12420 (groL)
Exosomal proteins of breast cancer cells
G3545_12420 (groL)
Exosomal proteins of colorectal cancer cells
G3545_12420 (groL)
Exosomal proteins of bladder cancer cells
G3545_12420 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QJP14375
LinkDB
All DBs
Position
complement(2582527..2584167)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFSSDARDKMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDRFENLGAQLVREVASKTNDTAGDGTTTATVLAQAIVKEGAKSVAAGMNPMDLKRGI
DLAVAEAIKDISKRAKKVKNTDEVAQVGTISANGDASIGQMIAGAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFITNAEKMVADLEDAYLLIFDKKLSGLQAILPVLEQI
VQSGKPLVIVAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLESVNLAMLGRAKKVIIEKEKTTIVDGAGKKKDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGIALL
RAKKAVEKLTSDNPDIAAGIKIVLRALEAPIRQIAENAGVEGSIVVGKVQESKDQNFGFN
AQTEQFVDMIASGIVDPAKVVRTALQDAASVSGLLVTTEALIADLPKPPSGAPAMPGGGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaagtaaaattctcctccgatgcgcgtgacaagatgctccgcggcgtc
gacatcctcgccaatgccgtcaaggtgacgctcggccccaagggccgcaacgtcgtcatc
gagaagagcttcggcgccccgcgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgaggatcgcttcgagaatctcggcgcccagctggtgcgtgaagtcgcttccaag
accaacgacaccgccggcgacggcaccaccaccgccaccgtgctggcgcaggccatcgtg
aaggaaggcgccaagtcggtcgccgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgccgtcgccgaggcgatcaaggacatttccaagcgcgccaagaaggtgaagaac
accgacgaagtcgcccaggtcggcaccatctccgccaatggcgacgcctcgatcggccag
atgatcgccggcgcgatgcagaaggtcggcaatgagggtgtcatcaccgtcgaggaagcc
aagaccgccgagaccgagctcgaagtggtcgagggcatgcagttcgaccggggctacctc
tcgccctacttcatcaccaatgccgagaagatggtcgccgacctcgaagacgcctacctg
ctgatcttcgacaagaagctctcgggtctccaggcgatcctcccggtcctcgagcagatc
gtccagtccggcaagccgctcgtcatcgtggcggaagacgtcgagggcgaggccctggcc
acgctcgtcgtcaacaagctgcgcggcggcctcaaggtcgcggcggtgaaggctccgggc
ttcggcgatcgccgcaaggccatgctggaagacatcgccatcctcaccggtggccaggtc
atctccgaagacctcggcatcaagctggagagcgtcaatctcgccatgctcggccgcgcc
aagaaggtgatcatcgagaaggaaaagaccaccatcgtcgatggcgccggcaagaagaag
gacatcgaaggccgcgtcgcgcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgcgagaagctgcaggagcgtctggccaagctcgccggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgaagtcgaagtgaaggaaaagaaggaccgcgtcgacgacgcgctg
aacgccacccgcgctgcggtggaagaaggcatcgtcccgggcggcggcattgccctgctg
cgcgccaagaaggcggtggagaagctgacctccgacaatcccgacatcgctgccggcatc
aagatcgtgctgcgcgcgctggaagccccgatccgccagatcgccgagaatgcaggcgtg
gaaggctcgatcgtggtcggcaaggtgcaggaatcgaaggaccagaacttcggcttcaac
gcccagaccgagcagttcgtcgacatgatcgcctccggcatcgtcgacccggccaaggtc
gtgcgcaccgctctgcaggacgcggcttccgtgtccggcctgctggtcaccaccgaagcc
ctgatcgccgacctgccgaagcccccgtcgggcgccccggccatgccgggcggcggcggc
atgggcggcatggacttctga
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