Starkeya sp. ORNL1: G3545_12820
Help
Entry
G3545_12820 CDS
T06785
Name
(GenBank) hypothetical protein
Organism
star
Starkeya sp. ORNL1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
QJP14443
LinkDB
All DBs
Position
2677441..2683017
Genome browser
AA seq
1858 aa
AA seq
DB search
MSQKSRISKDATLLAVEEALNLGSAANSREGARETPRTARPAADGETGQTRRPVTARETR
AAMDGLRVVDEALTPPPAAERAQQRPQIREREQIRDREPVREPEPARDLDEDADQVQRYL
ASYEDEDGRGRGAHPGQYAPQGQYAPQAQYAPQAQYAPQAHMAPVHVSQGGGNGARLVQP
SRASHGGSPKHRSPESLEGAADLIAGMKRSPSMLPFVIAGIAALIWLAVAGLISYANFCD
ECGPVMDALRSGGPSPLGTLLLLLAPPAFLFVVAALVRRTMEMSRVSRALAEVTTRLTEP
ATMANESIISVSQAMRSEVAAMDVALERAVGRATELEVMVRTEVGALERAYEENEARVRS
LVEEMRADRKNVLSHAEQLRNAISGAHEMLQGETDQVSDRISRSVGDAAERIAETFNDQG
QQIAFSISSANDVMIDSLTERSAKLLERFEKTGAELGARLGDGNDRLVAKMTVKAYEIQD
HVARITAKGAKTLAERAEEMAEHMRRTTGEVVDLAAKRSEELHVKLAATTTEISETLLGT
GSRVIESIAASGSEVHQVLQTTGSTVSGDIAARGQELVTQMSATGTGFIQTLKQSGDAAI
LRMEERGNAFFDAVLARGTEVDRRLDDTAERISAAVTASGARAVEGLAKFQSSGEGLADT
LARRGEAVVTQIEAQSNRLVEAVDARSALINSTFVDTARRVSEALEKAGASAVGGFARFQ
VIGETLSEAIGKRGEQAAGALEARGALLIEAADARSAKIGAKLDDTARRLTDALEKSSGE
AMGGFARFLGAGEALSEAIGKRGELASSALDAQGTRLLDAAEARTVKIDSRLDETARRLA
ETLEKASAEAVEGFARFHASGQTLSKALGKRAHEAAAAIEAQGNKLLDAADARGARFDTK
LDDTARRIAETLDQASTTAVDGFARFLASGEALSEALGKRGQEAAANLEAHGAKILDAAD
TRSAKIDTKLDDTARRIAETLEHASTGAIDGFARFLASGEALSEALGKRGQEAAASLEAH
GVKILDAADTRSAKIDTKLEDTARRIAETLEHASAGAIEGFSRFLANGEVLSDTLGKRGQ
EAAAAITAHGAKLLEAVETRGAKIDAKLEDTAKRLSEALDQASTGAVDGFARFLANGEAL
AEMLGKRGEDVAATIEAHGTRLLDASEVRSAKLDAKLDDNALRIAELIEKSSAEAAEGFA
RFHASGEALSETLLTRGEQAAAALESRGNAFLDAVLARSSEADRRLDDTAVRVTQAIDAS
GSNAASGFAEIKIASLMLSESLARRGGELSESLAQTVRDVTDVIRTHADSMNDRLSENGG
RVFDAVVARGLELDRRVAETGGRVTARIEEAERSVQASLTGESSRLISAIEGGAARAGQA
IATAATESAGLVERTGTRTAEALRHATTDTLQLLERTGGDVAQSFAGFRSAGEALAGDLA
KRSAEVMRQLDESHRQFAQTLADQQVVSAARIGETESRLGETLGRHVDAVVSLVDAAGAR
ADANADETAARLETQVARLAGQFDEAGRAFTQINASAAEGLGKQIESLVGMVDEAGGRLA
RELAATSDGYTQSLDKVRAEMAEALEKSSAEMAERLESRSEQAMAHIVASTERLNDTLNQ
FSRLASARLGLPLLTATTPARLATPGTGADLWLSQHLTDRAYAGAAGTALHLRDSSAAER
LQPELARDERLLWAGRPSASRVFKSELAWLLVAGLMLVAQAVAYGVLAYQGSLPIENAAL
RLGVGIAAGLAGLVGIGLIIAERVRAARSKATLYGLTTQRILVLVDREGRRAVDSLPLAS
IGRIEKHLHPDTTGTLILSGHGRESGEVLRLVGIEDAPAVDAALRQVACAGRPLLGAF
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaagtcacgaatctccaaggatgccaccctcctcgcagtcgaggaggcgctt
aatctcgggtctgcggccaacagccgcgagggcgcccgagaaacgccacgcaccgcacgc
ccggctgccgatggcgagaccgggcagacgcggcgtccggtcacggcgcgcgagacccgc
gccgccatggacgggctgcgcgtcgtcgacgaggcgctcaccccgccgccggccgccgaa
cgggcgcagcagcgcccgcagatccgtgagcgcgaacagatccgtgaccgcgaaccggtc
cgagagccagagcctgcacgtgatctggacgaggatgcggaccaggtgcagcgttatctc
gccagctatgaagatgaagacgggcgcgggcgcggcgcccacccggggcaatatgcaccg
caaggtcaatatgcgccgcaagcccagtacgcgccgcaagcgcagtatgctcctcaggcc
cacatggcgccggtgcatgtcagccagggcggcggcaatggcgcgcggctggttcagccc
tcacgggcgagccatggcggctcccccaaacaccgctcgccggaaagcctcgaaggcgcc
gccgacctgatcgccgggatgaagcgctcgccctccatgctgcccttcgtgatcgccggc
attgccgcgctgatctggctcgcggtggcgggtctcatctcctatgcgaatttctgcgac
gagtgcggcccggtgatggacgcgctgcgcagcggcgggccgtccccgctcggcaccctg
ctgctgctgctggcgccgccggccttcctcttcgtcgtcgccgcgctggtgcgccgcacc
atggagatgagccgggtatcgcgcgctctcgccgaagtgaccacacggctcaccgagccg
gccaccatggcaaacgaatccatcatctcggtcagccaggccatgcgctccgaagtggcg
gcgatggacgtggcgctggagcgcgccgtcggccgcgccaccgagctcgaagtgatggtg
cgcaccgaagtcggcgcgctggagcgtgcctatgaggagaacgaggcccgggtgcgctcg
ctcgtcgaggagatgcgcgccgaccgcaagaacgtgctctcccatgccgagcagctgcgc
aacgcgatctccggcgcgcacgagatgctgcagggcgaaaccgaccaggtaagcgaccgc
atcagccgcagcgtgggcgacgccgccgagcgcatcgccgaaaccttcaacgaccagggc
cagcagatcgccttctcgatcagcagcgccaatgacgtgatgatcgacagcctcaccgaa
cgcagcgccaagctgctggagcgcttcgagaagaccggcgccgagctcggcgcccgactc
ggcgacggcaatgaccggctcgtcgccaagatgacggtcaaggcctacgagatccaggac
cacgtcgcccgcatcaccgccaagggtgccaagacgctggccgagcgcgccgaggagatg
gccgagcacatgcgccggactaccggcgaagtggtcgacctcgccgccaagcgctccgag
gaactgcacgtcaagctcgccgcgaccacgaccgaaatcagcgagacgctgctcggcacc
ggctcgcgggtgatcgagagcatcgccgccagcggcagcgaagttcaccaggtgctgcag
accaccggttccaccgtgagcggcgatatcgccgcgcgcggccaggaactggtgacgcag
atgagcgccaccggcaccggcttcatccagacgctgaagcagtcgggcgatgccgccatc
ctgcgcatggaagagcgcggcaacgccttcttcgacgccgtattggcgcgcggcacggaa
gtcgaccgccggctcgacgacaccgccgagcgcatctccgccgcggtcaccgcttccggc
gcccgcgcggtggaagggctggcgaaattccagtcctccggcgaggggctcgccgacacg
ctggcgcgccgcggcgaggccgtggtcacgcagatcgaggcacagagcaaccggctggtc
gaggcggtcgacgcgcgcagcgcactgatcaactcgacgttcgtggataccgcccgccgg
gtctccgaagcgctggagaaggccggcgcgagcgcggtcggcggcttcgcccgcttccag
gtcattggcgagacactgtcggaagccatcggcaagcgcggcgagcaggcggccggcgcg
ctcgaagcgcgcggcgccctgctgatcgaggcggcggacgcccgcagcgccaagatcggc
gccaagctcgacgacaccgcgcgccggctgaccgatgcgctggagaaatcaagcggcgag
gcgatgggcggcttcgcgcgcttcctcggtgccggcgaggcactatcggaagcgatcggc
aagcgcggcgaactggcctcaagcgcgctggatgcgcagggcacacggctgctggacgcc
gccgaggcgcgcaccgtcaagatcgacagccggctcgacgagaccgcgcgccggctcgcc
gagacgctggaaaaggcgagcgccgaggcggtggagggctttgcccgcttccatgcgtcc
ggacagacgctttccaaggcgctcggcaagcgcgcccatgaggccgccgccgccatcgag
gcccagggcaacaagctgctggacgcagccgatgcccgcggtgcccggttcgacaccaag
ctcgacgacaccgcccgtcgcatcgccgagacgctggatcaggccagcaccacggcggtc
gacggcttcgcccgcttcctcgcctccggcgaggcgctctccgaagcgctcggcaagcgc
ggccaggaagcggcggcgaacctcgaggcgcatggcgccaagatcctggacgccgcggac
acccgcagcgccaagatcgacaccaagctcgacgacaccgcccgccgtatcgccgagacg
cttgagcacgccagcaccggagcgatcgacggcttcgcccgcttcctcgcctcgggcgag
gcgctctccgaagcgctcggcaagcgcggccaggaagccgcggcgagcctcgaggcacac
ggcgtgaagatcctcgacgccgcggacacccgcagcgccaagatcgacaccaagctcgaa
gacaccgcccgccgcatcgccgagacgctggagcacgccagcgccggggcgatcgagggg
ttctcccggttcctcgccaatggcgaggtgctgtccgatacgctcggcaagcgcggccag
gaggctgctgcggccatcactgcgcatggcgccaagctgctggaagcggtcgagacccgc
ggcgccaagatcgacgccaagctggaggacacggcgaagcggctgtcggaggcgttagat
caggccagcaccggcgcggtcgacggtttcgcccgcttcctcgccaatggcgaagcgctc
gccgagatgctcggcaagcgcggcgaggatgtcgccgccaccatcgaggcgcacggcacc
cggctgctggacgcttccgaggtgcgtagcgccaagctcgacgccaagctcgacgacaat
gccctccgcatcgccgaactcatcgagaagtcgagtgccgaggcggcggaaggctttgcc
cgcttccacgcttccggcgaagcgctctccgagaccctgctcacccgcggcgaacaggcc
gcggctgcgctggagtcgcgcggcaacgccttcctcgacgccgtgctggcgcgcagcagc
gaggccgatcgtcggctcgacgacaccgcggtgcgggtgacgcaggcgatcgacgcctcc
ggcagcaacgctgcctccggcttcgccgagatcaagatcgccagcctgatgctctcggaa
tcgctcgcccgccgcggcggcgaactctccgagtcgctggcgcagacggtgcgcgacgtc
accgacgtgatccgcacccacgccgacagcatgaatgaccggctgtccgagaatggcgga
cgggtgttcgatgccgtggtggcgcgcgggctcgagctcgaccgccgcgtcgccgagacc
ggcgggcgcgtcaccgcgcggatcgaggaggccgagcgttcggtgcaggcgagcctcacc
ggcgagagcagccggctgatctccgccatcgaaggcggcgcggcgcgcgccgggcaggcc
atcgccaccgccgccaccgagagcgcgggcctcgtcgagcgcaccggcacccgcaccgcg
gaagcgctgcgtcacgccaccaccgacacgctgcaattgctggagcgcaccggcggcgac
gtcgcacagagcttcgccgggttccgcagcgccggcgaggcactcgccggcgatctcgcc
aagcgcagcgccgaggtgatgcgccagctcgacgagagccaccggcaattcgcccagacg
ctggcagaccagcaggtggtcagcgccgcccgcatcggcgagaccgagagccggctcggc
gagacgctggggcgccatgtcgatgccgtggtgtcgctggtcgatgccgccggtgcccgt
gccgatgccaatgccgacgagaccgcggcacggctggagacccaggtcgcccggcttgcc
ggccaattcgacgaagccggccgcgccttcacgcagatcaacgcctcggccgccgaaggc
ctcggcaagcagatcgaatccctggtcggcatggtggacgaagccggcggccggctggcg
cgcgagcttgccgccacctcggacggctacacgcaatcgctcgacaaggtacgggccgaa
atggccgaggcgctggagaagtccagcgccgagatggcggaacggctggagagccgcagc
gagcaggcgatggcgcacatcgtcgccagcaccgaacggctgaacgacacgctcaaccag
ttcagccggctggccagcgcgcggctcggcctgccgctgctcaccgcgacgacgccggcg
cggctcgccacgcccggcactggcgccgatctctggctcagccagcatctgaccgatcgc
gcctatgccggcgcggccggcaccgcgctgcatctgcgcgacagcagcgccgccgagcgg
ctgcagccggagctcgcccgcgacgagcgcctgctctgggccggacggcccagcgcctcg
cgcgtcttcaagtcggagctcgcctggctgctggtcgccggcctgatgctggtggcgcag
gccgtggcctatggcgtgctggcctatcagggctcgctgccgatcgagaatgccgcgctg
cggctcggcgtcggcatcgcggccgggctcgccggcctggtcggcatcgggctcatcatc
gccgaacgggtgcgcgcggcgcgctccaaggcgacgctctatggcctcaccacgcagcgc
atcctcgtgctggtcgaccgcgagggacgccgcgccgtggacagcctgccgctcgccagc
atcgggcggatcgagaagcatctgcatcccgacaccacgggcacgctgatcctgtccggt
cacggccgggaatcgggcgaggtgctgcgcctcgtcggcatcgaggatgcgccggcggtg
gacgccgcgctgcggcaagtggcctgcgcggggcgccccctgctgggggcgttctga
DBGET
integrated database retrieval system
