KEGG   Starkeya sp. ORNL1: G3545_15635
Entry
G3545_15635       CDS       T06785                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
star  Starkeya sp. ORNL1
Pathway
star02020  Two-component system
Brite
KEGG Orthology (KO) [BR:star00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G3545_15635
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:star02022]
    G3545_15635
Two-component system [BR:star02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   G3545_15635
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 Mg_chelatase AAA_16 AAA_22 AAA T2SSE HTH_30
Other DBs
NCBI-ProteinID: QJP17685
UniProt: A0A858X384
LinkDB
Position
complement(3296127..3297464)
AA seq 445 aa
MMDVAFIDDDEALRAANVQALMLAGFTVASYPSAMAALDDLDADFPGIVVSDVRMPRIDG
LELFRRLRRLDAELPVILITGHGDISMAVEAMREGAYDFIPKPYALDRLLVAVRHALDKR
RLVLENRALRRKAEAATLDLPLLGHAPEMERLRQRVRQIADADIDVLVEGETGSGKEVVA
QTLHRWSPRGTRPFVAVNCGALPENVIESELFGHEAGAFTGALKKRIGRVEHASGGTLFL
DEIEAMSPALQVKMLRVLEAREIMPLGTNEVRRVDIRVVAASKVDLQDLVRRGGFREDLY
YRLHVAFIRIPPLRERREDVALLFGHFLARAAKRFRREPPLIEEAMRRHLDTHEWPGNVR
ELAHYAERVALGLTPENGPAAPPGGSSLPERVDAFEAAQIRETLAACRGDIQATLRALGI
PRKTLYDKLRRHGIDQARFRASGPS
NT seq 1338 nt   +upstreamnt  +downstreamnt
ctgatggacgtcgccttcatcgacgatgacgaggcgctgcgcgcggccaacgtgcaggcg
ctgatgctggccggcttcaccgtcgcgtcctacccgtccgccatggccgcgctggacgat
ctcgatgcggatttcccagggatcgtggtcagcgacgtgcgcatgccgcggatcgacggc
ctcgaactgttccgccggctgaggcggctggatgccgagctgcctgtaatcctgatcacc
ggccatggcgacatctccatggcggtcgaagcgatgcgcgaaggcgcctacgacttcata
cccaagccctacgcgctcgaccggctgctcgtggcggtccgccatgcgctcgacaagagg
cgcctcgtcctcgagaaccgcgcgctccgccgcaaggcggaggctgcgaccctcgatctg
ccgctgctcggccatgcgccggagatggagcggctgcgccagcgggtgcggcagatcgcc
gacgccgacatcgacgtgctggtggaaggcgagaccggcagcggcaaggaggtggtggcg
cagacgctgcaccgctggagcccgcgcggcacccgccccttcgtcgcggtgaattgcggg
gcgctgccggagaacgtcatcgagagcgaattgttcggccatgaggcaggcgccttcacc
ggggcgctcaagaagcggatcggccgtgtcgagcacgccagcggcggcactctgtttctc
gacgagatcgaggcgatgtcgccggcgctccaggtgaagatgctgcgcgtgctcgaagcg
cgggaaatcatgccgctcggcaccaacgaggttcgccgcgtcgacatccgcgtggtggcg
gcctcgaaggtcgatctgcaggatctggtccggcgcggcggcttccgcgaggatctctat
taccgcctgcacgtcgccttcattcgcatcccgccgctgcgcgagcggcgcgaggatgtc
gcgctgctgttcggccacttcctcgcccgtgccgccaagcgcttccgccgcgaaccgccg
ctgatcgaggaggcgatgcgccggcatctcgacacgcatgagtggccgggaaatgtgcgc
gagctcgcccactatgccgagcgcgtcgccctcggcctcacgcccgagaacggcccggcg
gcaccccccggcgggtcgagcctgccggagcgggtcgatgccttcgaggctgcgcagatc
agggaaacgctcgccgcctgccgcggcgacatccaggcgacgctgcgcgcgctcggcatc
ccgcgcaagacgctctacgacaagctgcggcgccacggcatcgaccaggcacgcttccgc
gcgtcaggcccgagctga

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