Starkeya sp. ORNL1: G3545_17060
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Entry
G3545_17060 CDS
T06785
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
star03400
]
G3545_17060 (addB)
Enzymes [BR:
star01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3545_17060 (addB)
DNA repair and recombination proteins [BR:
star03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G3545_17060 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
NYD-SP28_assoc
Motif
Other DBs
NCBI-ProteinID:
QJP15208
UniProt:
A0A858X2A5
LinkDB
All DBs
Position
complement(3591518..3594562)
Genome browser
AA seq
1014 aa
AA seq
DB search
MSRTPRLFTVPASAPFLATLAGALLDGDLVPGFAPRGDPLALASATVFLPTRRAGRLLGE
ALLAQTSGATLLPRIVPLGDVDEDALAFAEEFTEPPSSVPATTRRLALANLVGRWRDLLR
DDDGRAAVAAGPGAGLALADALGQLIDEMAAQEVPWERLDDLVPGEHDRYWDMALDFLKI
AREAWPALLAAMNAIDGSVRRDRLIAAEAARLAALGEDAGPVIAAGSTGSMPATARLLAS
VARLPLGALVLPGLDTDLDEAAWRGLIDKEQPAPSHPQYGLARLLALVGVEREDVKVLGA
PALFGRERLLSEALRPALATDAWASLGNAWPATVGTALADVAVIEADDAREEALTIAIAL
RETLETADRTAALVTPDRDLARRVAAELLRFGIAIDDSAGEPLSESVAGRLARLVADAAA
DELAPVPLVGLLRHPHARFGLEASALASVTDALELMVLRGPRPAADADGLIAAVAGFDPR
NFHRTDPRRGIGDSERSIAADLAGRIGAALTPLLALGRCSHPFADLVAVHRAACDAVREG
FAAAPGDAATLILAEAFDALGEGGPYASDMTLADYASALPDLFSAWSVRPPLDANARLRI
LGPLEARLVAVDRMVLAGLVEDGWPAAVRSDPWLSRPMRAALGLEAPERRIGLSAHDFAQ
FCGAPELILARAAKVGGAPTVPSRFLQRLAAVSGEVRWHDTLARGERFRRLARLIDADPP
AARISRPAPTPAVELRPTMLSVTEIETWLRDPYSIYARHILKLRPLDGLDAAPGAAERGS
AVHEALGDFAQAYPEALPANAETALRDFGRHAFAPLEAFPAEHALWWARFERLIPAFLAW
ERMRRAELSRIVAETGGRISLAGTRGPFRLAGYADRIEVRRDGALAILDYKTGVVPTAKQ
TAALYSPQLPLEAGIAARGGFDGVPPAPTADLVYVRLRSGNPPLEEKSVVGTDASAATLA
DATLERLETLVRAFENPAQGYVALRRPMFRGNTGDYGHLARVGEWSISGEGEGE
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcacgccgcgcctcttcaccgtgccggcctccgcgccgttcctggcgacgctg
gccggggcgctgctggacggtgatctagtgcccggcttcgcgccgaggggtgatccgctc
gcgctcgcctccgccaccgtgttcctgcccacccgccgcgccggccggctcctcggtgag
gcgctgctggcgcagaccagtggtgcgacgctgctgccgcgcatcgtaccgctcggcgat
gtcgacgaggacgcgctggccttcgccgaggaattcaccgagcccccctcctcggttccc
gccacgacgcgccgcctcgccctcgccaaccttgtcgggcgctggcgcgacctgctgcgc
gacgatgacgggcgggccgcggttgcagccggcccgggcgccggcctcgcgctcgccgat
gcgctgggccagctgattgacgagatggcggcgcaggaagtgccatgggagcggctcgac
gacctcgttccgggcgagcacgaccgctattgggacatggcgctcgatttcctgaagatc
gcgcgcgaggcctggccggcattgctcgccgcgatgaatgccattgacggcagcgtgcgg
cgcgaccggctgatcgccgccgaggccgcccgccttgccgcgctcggggaagatgccggc
ccggtgatcgcggccggctcgaccggctcgatgccggcgaccgcccgcctgctggccagc
gtcgcccggctgccgcttggcgcgctggtattgcccggcctcgacaccgatctggacgag
gcggcgtggcgcggcctgatcgacaaggagcagccggcgccgagccacccgcaatatggt
ctcgcccggctgctggcgctggtcggcgtcgaacgcgaggatgtgaaggtgctcggcgcg
cccgccctttttggccgcgagcgcctgctgtccgaggcgctgcgccccgcgctcgccacc
gacgcctgggccagccttggcaatgcctggccggcgacggtcgggacagcgttggcggat
gtcgcggtcatcgaggcggacgatgcccgcgaggaggcgctcaccatcgccatcgccttg
cgcgagacgctggagactgcggacaggaccgcggctctggtgacgccggaccgcgatctc
gctcgccgtgtcgcggcggaactgctgcgcttcgggatcgcgatcgacgattccgccggc
gagccgctgtccgagagcgttgccggccggctcgcccggctggtcgccgacgctgcggcg
gacgaactggcaccggtgccactggtggggctgctgcgtcatccgcacgcccgcttcggg
ctggaggcaagcgcgctggcgagtgtcaccgacgcgctggaattgatggtgctgcgcggc
ccgcgccccgccgcggacgcggatgggctgatcgccgccgtggccgggttcgatccgcgc
aatttccaccgcaccgatccgcgtcgcggcattggcgacagcgagcgcagcatcgccgcc
gatctcgcgggccgcatcggtgcggcgctgacgccgctgctcgctctcgggcgctgctcg
caccctttcgccgatctcgtcgccgtgcaccgtgcggcgtgcgacgcggtgcgcgagggt
ttcgccgcggctcccggcgatgcggcaacgcttatcctggcggaggccttcgatgcgctc
ggcgagggcggaccttacgcctcggacatgacgttagccgactatgcgtcggctttgccg
gatctgttctcggcctggtcggtgcgcccgccgctcgacgccaacgcccggctgcgcatc
ctcggcccgctggaagcccgtctcgtcgcggtcgaccgcatggtgctggcggggctggtc
gaggatggctggccggcggcggtgcgctccgatccctggctcagtcggccgatgcgtgcg
gcactcgggctggaggcgccggagcggcgcatcggcctgtctgcccatgacttcgcgcag
ttctgcggcgcgccggaactcatcctcgcccgcgccgccaaggtcggcggtgcgccgacc
gtgccctcgcgcttcctccagcggctggcggcggtgagcggtgaagtgcgctggcatgac
acgctcgcgcgtggcgagcgtttccgccggctcgcccggttgatcgatgccgacccgccc
gccgcgcgcatctcccggccggcgccgacgccggctgtcgagctgcgcccgaccatgctc
agcgtgaccgagatcgagacctggctgcgtgatccctattccatctatgcgcgccacata
ttgaagctgcgcccgctcgacgggctcgacgctgccccgggtgccgcagagcgtggcagt
gcggtgcatgaagcgctgggcgatttcgcgcaggcctatcccgaggcgcttccggcgaac
gccgagaccgcgctgcgcgatttcggccggcatgctttcgcgccgctggaggcatttccc
gccgagcacgcgctgtggtgggcgcgcttcgagcggctgatcccggccttcctcgcctgg
gagcggatgcggcgcgccgagctttcccgcatcgtcgccgaaacgggcgggcgcatcagc
cttgccggcacccgcgggccgttccggctcgccggctatgccgatcgcatcgaagtgcgc
cgcgacggcgcgctggcgatcctcgactacaagaccggcgtcgtgccgacggcaaagcag
accgccgcgctctattcgccgcaattgccgctggaagccggcatcgccgcgcgcggcggc
ttcgatggggtgccgccggcgccgacggcggacctcgtctatgtccggctgcgctccggc
aacccgccgctcgaagagaagagcgtggtcggcaccgatgccagcgcagcgacgctcgcc
gatgccactctggagcggctggagacgctggtgcgcgccttcgagaacccggcgcagggc
tatgtcgcgctgcgccggccgatgttccgcggcaataccggcgattacggccatctggcg
cgggtcggcgaatggtcgatcagtggcgagggtgagggcgaatga
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